Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01160 and BSU06820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:49
# Commandline: needle
# -asequence dna-align/BSNT_01160.1.22522.seq
# -bsequence dna-align/BSU06820___yeeG.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01160-BSU06820___yeeG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01160-BSU06820___yeeG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01160
# 2: BSU06820___yeeG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1237
# Identity: 616/1237 (49.8%)
# Similarity: 616/1237 (49.8%)
# Gaps: 587/1237 (47.5%)
# Score: 2923.5
#
#
#=======================================
BSNT_01160 1 ATGACCATTTCCCTTCTTTTGTTCGCTCAATATCAAAATTTTACCACGGG 50
BSU06820___ye 0 -------------------------------------------------- 0
BSNT_01160 51 GTGGGATGATGGTGGGTGTGAGAACGTGTTTTGGTGGAAAAATGAGTCAT 100
BSU06820___ye 0 -------------------------------------------------- 0
BSNT_01160 101 TTGGCATGTGTCTTTATTCGTGGAGGGATTGGCGGAAACATGGTCGAAAT 150
BSU06820___ye 0 -------------------------------------------------- 0
BSNT_01160 151 GATATTGATTGCTACACATTTTTTGGAAGTTTGTATTCTATATTGTTTTT 200
BSU06820___ye 0 -------------------------------------------------- 0
BSNT_01160 201 AAGGAGCATGATGATGAAGAAAAAATGGATTACATTTGGTTTATTAGTTT 250
||||.|||||||.||||||||||||||||||||||||
BSU06820___ye 1 -------------ATGACGAAAAAACGGATTACATTTGGTTTATTAGTTT 37
BSNT_01160 251 TAATGGTATGTGTCATCCTGTTTGTTCTGTATGTTCAGTTACGCAATAAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06820___ye 38 TAATGGTATGTGTCATCCTGTTTGTTCTGTATGTTCAGTTACGCAATAAA 87
BSNT_01160 301 GACAGTATTCATGTCCAATCTTCCGCCATCCACCCCGAAGAAGACCGCAT 350
||.|||||||.||||||||||||||||||.||||||||||||||||||||
BSU06820___ye 88 GATAGTATTCCTGTCCAATCTTCCGCCATTCACCCCGAAGAAGACCGCAT 137
BSNT_01160 351 CTTTTTTATCTACTCCAATCCTTTCATAAAAGAAAGCGTGCTGGTTTCAA 400
|||||||||.|||||||||||||||||||||||||||||||||.||||||
BSU06820___ye 138 CTTTTTTATTTACTCCAATCCTTTCATAAAAGAAAGCGTGCTGCTTTCAA 187
BSNT_01160 401 CCTCTACAGGCGAACGGTTTAACAGGCGTACGTTTAAGGTGGCGGATGTG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06820___ye 188 CCTCTACAGGCGAACGGTTTAACAGGCGTACGTTTAAGGTGGCGGATGTG 237
BSNT_01160 451 CCTTATATTCAAACGAAATCTTATGCATCAACAGAACTTGTATTATTGGC 500
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU06820___ye 238 CCTTATATTCAAACGAAATCTTATGCATCAACAGACCTTGTATTATTGGC 287
BSNT_01160 501 GGAACACGAGCCTTTTTACTACACGCTGGAGAAGGATGCGATCAAAGAGC 550
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU06820___ye 288 GGAACACGAGCCTTTTTACTACACGCTGGAGAAGGATGTGATCAAAGAGC 337
BSNT_01160 551 ATCCGCTTTCAGATCCAATTGCGTTTTGGTATGAGGGGAAGGATGTGTCT 600
|||||||.|||||||||.||||||||||||||||||||||||||||..||
BSU06820___ye 338 ATCCGCTGTCAGATCCATTTGCGTTTTGGTATGAGGGGAAGGATGTCACT 387
BSNT_01160 601 GTTAAGGCCTATAATGTTGATACGACGGGGAATGAGATTCACATAAATGA 650
.||.|||||||||||||||||||||||||.||||||||.||||||||.||
BSU06820___ye 388 ATTGAGGCCTATAATGTTGATACGACGGGAAATGAGATCCACATAAACGA 437
BSNT_01160 651 TAAAAAAATGAAAAAGGAATATAGCCTTACCTTACCTTCGCTTGTCACGA 700
.|.|||||.||||||||||||||.|||||||||.|||.||||||||||.|
BSU06820___ye 438 CAGAAAAACGAAAAAGGAATATACCCTTACCTTGCCTCCGCTTGTCACAA 487
BSNT_01160 701 TGGGGGCCAGTGATGAGAACTATATTTATATCATTCAAAGTATGTCTATT 750
|||||||||||||||||||||.||||||||||||||||||.|||||||||
BSU06820___ye 488 TGGGGGCCAGTGATGAGAACTTTATTTATATCATTCAAAGCATGTCTATT 537
BSNT_01160 751 TACGTGATTGATAGAAAAACAGAGGAAATGATTAAGACCCTGAGTTTAGC 800
|||||||||||.|||||||||||||||||||||.||||||||||.|||||
BSU06820___ye 538 TACGTGATTGACAGAAAAACAGAGGAAATGATTGAGACCCTGAGCTTAGC 587
BSNT_01160 801 CTCATACAG--GATCAATTCGCAGACTCGGAAGAATTTATCGTCGCGAGC 848
||||||| | ||||||||||||||||||||.||||||||||||||||||
BSU06820___ye 588 CTCATAC-GCTGATCAATTCGCAGACTCGGAGGAATTTATCGTCGCGAGC 636
BSNT_01160 849 TCGGAGCATGAACTGA---------------------------------- 864
|||||.|||.||.|||
BSU06820___ye 637 TCGGATCATAAATTGACTGTGATTGAAAAAGGGACATGGAAGACGACATA 686
BSNT_01160 864 -------------------------------------------------- 864
BSU06820___ye 687 TATTGCGTATCCTGAAGATCTTGAATATGCAGATACTGTGTACTATGACA 736
BSNT_01160 864 -------------------------------------------------- 864
BSU06820___ye 737 AAGAAAGCGGCAGTTTTTACGTGGCGTACGAGGACAAAGAGGGTGGAGCG 786
BSNT_01160 864 -------------------------------------------------- 864
BSU06820___ye 787 AACTTGCTGGAATATGGGGAGGATTTTTCTATTCACACATACAGCTTGAA 836
BSNT_01160 864 -------------------------------------------------- 864
BSU06820___ye 837 ATTCCCTTATATGGAGGCGAAGTTTAAGGGGAATCTATTGTATATAGTTG 886
BSNT_01160 864 -------------------------------------------------- 864
BSU06820___ye 887 CCCAGGAAGAGCATAAAAAGGGCATCGGCGGATACGTGGGTGTGTTTGAT 936
BSNT_01160 864 -------------------------------------------------- 864
BSU06820___ye 937 ATCCATTCTAAGGAGATGCTTTATCAGTTTGATTTGCCTGAGGAACAGGT 986
BSNT_01160 864 ------------------------------------- 864
BSU06820___ye 987 GAAGGTTCAGGATTTTGTTGTGGTTGACAATAAGTGA 1023
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