Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01133 and BSU06620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:45
# Commandline: needle
# -asequence dna-align/BSNT_01133___ligA.1.22522.seq
# -bsequence dna-align/BSU06620___ligA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01133___ligA-BSU06620___ligA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01133___ligA-BSU06620___ligA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01133___ligA
# 2: BSU06620___ligA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2007
# Identity: 1977/2007 (98.5%)
# Similarity: 1977/2007 (98.5%)
# Gaps: 0/2007 ( 0.0%)
# Score: 9765.0
#
#
#=======================================
BSNT_01133___ 1 ATGGACAAAGAAACAGCGAAGCAGCGGGCAGAAGAACTGCGCCGCACCAT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1 ATGGACAAAGAAACAGCGAAGCAGCGGGCAGAAGAACTGCGCCGCACCAT 50
BSNT_01133___ 51 CAACAAGTATAGCTATGAATATTACACCCTAGATGAACCGAGCGTCCCTG 100
||||||||||||||||||||||||||||.|||||||||||||||||||.|
BSU06620___li 51 CAACAAGTATAGCTATGAATATTACACCTTAGATGAACCGAGCGTCCCAG 100
BSNT_01133___ 101 ATGCGGAATATGACAGATTGATGCAGGAGCTGATCGCGATCGAGGAGGAG 150
||||.|||||.|||||||||||||||||||||||||||||||||||||||
BSU06620___li 101 ATGCCGAATACGACAGATTGATGCAGGAGCTGATCGCGATCGAGGAGGAG 150
BSNT_01133___ 151 CATCCAGATCTCAGAACGCCTGACTCTCCTACGCAGCGCGTCGGCGGAGC 200
||.|||||.|||||||||||||||||||||||||||||||||||||||||
BSU06620___li 151 CACCCAGACCTCAGAACGCCTGACTCTCCTACGCAGCGCGTCGGCGGAGC 200
BSNT_01133___ 201 CGTGCTTGAAGCGTTTCAAAAAGTCACCCACGGCACACCGATGCTCAGTC 250
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU06620___li 201 CGTGCTTGAAGCGTTTCAGAAAGTCACCCACGGCACACCGATGCTCAGTC 250
BSNT_01133___ 251 TGGGCAACGCCTTTAATGCTGATGATCTTCGTGATTTCGACCGCCGTGTG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 251 TGGGCAACGCCTTTAATGCTGATGATCTTCGTGATTTCGACCGCCGTGTG 300
BSNT_01133___ 301 CGCCAAGCCGTCGGTGACGATGTGGCGTATAATGTGGAGCTGAAAATAGA 350
|||||..|||||||.|||||||||||||||||||||||||||||||||||
BSU06620___li 301 CGCCAGTCCGTCGGCGACGATGTGGCGTATAATGTGGAGCTGAAAATAGA 350
BSNT_01133___ 351 CGGTCTTGCTGTTTCTCTCCGTTATGAAGACGGCTATTTTGTCAGAGGGG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 351 CGGTCTTGCTGTTTCTCTCCGTTATGAAGACGGCTATTTTGTCAGAGGGG 400
BSNT_01133___ 401 CCACCCGAGGTGACGGAACGACGGGAGAGGATATTACGGAGAATCTGAAG 450
||||..||||||||||.|||||||||||||||||.|||||||||||||||
BSU06620___li 401 CCACAAGAGGTGACGGGACGACGGGAGAGGATATCACGGAGAATCTGAAG 450
BSNT_01133___ 451 ACGATTCGCAATATCCCCCTCAAAATGAACCGTGAGCTGTCGATCGAAGT 500
|||||.||||||||||||||.|||||||||||||||||||||||||||||
BSU06620___li 451 ACGATCCGCAATATCCCCCTTAAAATGAACCGTGAGCTGTCGATCGAAGT 500
BSNT_01133___ 501 GCGCGGCGAGGCGTATATGCCGAAGCGTTCGTTTGAAGCACTCAATGAGG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 501 GCGCGGCGAGGCGTATATGCCGAAGCGTTCGTTTGAAGCACTCAATGAGG 550
BSNT_01133___ 551 AACGGATTAAAAATGAGGAAGAACCGTTCGCCAATCCGCGAAATGCCGCG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 551 AACGGATTAAAAATGAGGAAGAACCGTTCGCCAATCCGCGAAATGCCGCG 600
BSNT_01133___ 601 GCGGGATCACTTAGGCAGCTCGATCCGAAAATTGCAGCGAAACGAAACCT 650
||||||||.||.||.|||||||||||||||||||||||||||||||||||
BSU06620___li 601 GCGGGATCTCTCAGACAGCTCGATCCGAAAATTGCAGCGAAACGAAACCT 650
BSNT_01133___ 651 CGATATCTTCGTCTACAGTATAGCGGAGCTTGACGAGATGGGTGTGGAGA 700
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU06620___li 651 CGATATCTTCGTCTACAGTATAGCGGAGCTTGACGAGATGGGTGTAGAGA 700
BSNT_01133___ 701 CGCAAAGCCAAGGGCTTGATTTTCTCGACGAACTCGGATTTAAAACGAAT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 701 CGCAAAGCCAAGGGCTTGATTTTCTCGACGAACTCGGATTTAAAACGAAT 750
BSNT_01133___ 751 CAGGAACGAAAAAAATGCGGCGACATAGAAGAAGTCATTACGCTGATCGA 800
|||||||||||||||||||||..|||||||||||||||||||||||||||
BSU06620___li 751 CAGGAACGAAAAAAATGCGGCAGCATAGAAGAAGTCATTACGCTGATCGA 800
BSNT_01133___ 801 TGAGCTTCAGGCGAAGCGCGCTGACCTGCCGTATGAAATAGACGGCATTG 850
|||||||||||||||||||||.|||||||||||.||||||||||||||||
BSU06620___li 801 TGAGCTTCAGGCGAAGCGCGCGGACCTGCCGTACGAAATAGACGGCATTG 850
BSNT_01133___ 851 TTATTAAAGTCGATTCTCTCGATCAACAGGAGGAGCTCGGTTTTACGGCG 900
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 851 TCATTAAAGTCGATTCTCTCGATCAACAGGAGGAGCTCGGTTTTACGGCG 900
BSNT_01133___ 901 AAAAGCCCGCGCTGGGCCATCGCGTATAAGTTTCCTGCTGAAGAGGTCGT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 901 AAAAGCCCGCGCTGGGCCATCGCGTATAAGTTTCCTGCTGAAGAGGTCGT 950
BSNT_01133___ 951 GACGAAGCTTCTCGATATCGAATTAAATGTCGGCAGAACGGGTGTGATCA 1000
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU06620___li 951 GACGAAGCTTCTCGATATCGAATTAAATGTCGGCAGAACGGGTGTGATTA 1000
BSNT_01133___ 1001 CGCCGACCGCGATTCTTGAGCCGGTAAAAGTTGCCGGCACAACGGTCTCA 1050
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1001 CGCCGACTGCGATTCTTGAGCCGGTAAAAGTTGCCGGCACAACGGTCTCA 1050
BSNT_01133___ 1051 AGAGCATCCCTTCATAACGAAGATTTAATTAAAGAGAAGGACATTCGGAT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1051 AGAGCATCCCTTCATAACGAAGATTTAATTAAAGAGAAGGACATTCGGAT 1100
BSNT_01133___ 1101 TTTGGATAAGGTTGTCGTCAAAAAAGCGGGCGATATCATCCCGGAAGTTG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1101 TTTGGATAAGGTTGTCGTCAAAAAAGCGGGCGATATCATCCCGGAAGTTG 1150
BSNT_01133___ 1151 TGAATGTCCTCGTTGAACAGCGCACAGGAGAAGAAAAGGAATTCAGCATG 1200
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU06620___li 1151 TGAATGTCCTCGTTGACCAGCGCACAGGAGAAGAAAAGGAATTCAGCATG 1200
BSNT_01133___ 1201 CCGACGGAATGTCCTGAATGCGGCAGTGAACTCGTCCGGATCGAAGGAGA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1201 CCGACGGAATGTCCTGAATGCGGCAGTGAACTCGTCCGGATCGAAGGAGA 1250
BSNT_01133___ 1251 AGTGGCGCTTCGCTGCATTAACCCTGAATGTCCGGCGCAAATCCGGGAAG 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1251 AGTGGCGCTTCGCTGCATTAACCCTGAATGTCCGGCGCAAATCCGGGAAG 1300
BSNT_01133___ 1301 GGCTTATCCATTTCGTTTCCCGCAATGCCATGAACATTGATGGGCTCGGC 1350
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU06620___li 1301 GGCTTATCCATTTCGTTTCCCGGAATGCCATGAACATTGATGGGCTCGGC 1350
BSNT_01133___ 1351 GAACGAGTGATCACACAGCTGTTTGAGGAAAACCTTGTCCGCAATGTGGC 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1351 GAACGAGTGATCACACAGCTGTTTGAGGAAAACCTTGTCCGCAATGTGGC 1400
BSNT_01133___ 1401 AGATTTATATAAGCTGACGAAGGAACGAGTCATCCAGCTCGAGCGCATGG 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1401 AGATTTATATAAGCTGACGAAGGAACGAGTCATCCAGCTCGAGCGCATGG 1450
BSNT_01133___ 1451 GCGAAAAGTCCACTGAAAACCTGATCAGCTCCATCCAAAAATCAAAAGAA 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1451 GCGAAAAGTCCACTGAAAACCTGATCAGCTCCATCCAAAAATCAAAAGAA 1500
BSNT_01133___ 1501 AATTCGTTAGAGCGCCTGCTGTTTGGGCTTGGCATCCGTTTTATCGGATC 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1501 AATTCGTTAGAGCGCCTGCTGTTTGGGCTTGGCATCCGTTTTATCGGATC 1550
BSNT_01133___ 1551 AAAGGCCGCAAAGACGCTTGCCATGCATTTTGAAAGCTTGGAGAACCTGA 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1551 AAAGGCCGCAAAGACGCTTGCCATGCATTTTGAAAGCTTGGAGAACCTGA 1600
BSNT_01133___ 1601 AAAAAGCCTCTAAAGAGGAACTTCTCGCGGTAGATGAAATCGGTGAAAAA 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1601 AAAAAGCCTCTAAAGAGGAACTTCTCGCGGTAGATGAAATCGGTGAAAAA 1650
BSNT_01133___ 1651 ATGGCTGATGCTGTGATCACCTATTTTCATAAAGAAGAAATGCTTGAACT 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1651 ATGGCTGATGCTGTGATCACCTATTTTCATAAAGAAGAAATGCTTGAACT 1700
BSNT_01133___ 1701 CTTGAATGAACTTCAGGAGCTGGGCGTAAACACGCTCTACAAAGGCCCGA 1750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1701 CTTGAATGAACTTCAGGAGCTGGGCGTAAACACGCTCTACAAAGGCCCGA 1750
BSNT_01133___ 1751 AAAAAGTAAAAGCAGAGGACAGCGACTCTTACTTTGCCGGTAAAACAATT 1800
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU06620___li 1751 AAAAAGTAAAAGCAGAGGACAGCGACTCTTACTTTGCTGGTAAAACAATT 1800
BSNT_01133___ 1801 GTTCTGACAGGAAAGCTGGAAGAGCTGTCAAGAAACGAAGCCAAAGCGCA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1801 GTTCTGACAGGAAAGCTGGAAGAGCTGTCAAGAAACGAAGCCAAAGCGCA 1850
BSNT_01133___ 1851 AATCGAAGCGCTGGGCGGAAAGCTGACTGGAAGCGTCAGCAAAAACACAG 1900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1851 AATCGAAGCGCTGGGCGGAAAGCTGACTGGAAGCGTCAGCAAAAACACAG 1900
BSNT_01133___ 1901 ACTTAGTCATCGCCGGAGAAGCGGCGGGAAGCAAGCTGACAAAAGCACAA 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1901 ACTTAGTCATCGCCGGAGAAGCGGCGGGAAGCAAGCTGACAAAAGCACAA 1950
BSNT_01133___ 1951 GAGCTGAACATTGAAGTGTGGAATGAAGAACAGTTAATGGGAGAGCTAAA 2000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li 1951 GAGCTGAACATTGAAGTGTGGAATGAAGAACAGTTAATGGGAGAGCTAAA 2000
BSNT_01133___ 2001 GAAATAA 2007
|||||||
BSU06620___li 2001 GAAATAA 2007
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