Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01133 and BSU06620

See Amino acid alignment / Visit BSNT_01133 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:45
# Commandline: needle
#    -asequence dna-align/BSNT_01133___ligA.1.22522.seq
#    -bsequence dna-align/BSU06620___ligA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01133___ligA-BSU06620___ligA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01133___ligA-BSU06620___ligA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01133___ligA
# 2: BSU06620___ligA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2007
# Identity:    1977/2007 (98.5%)
# Similarity:  1977/2007 (98.5%)
# Gaps:           0/2007 ( 0.0%)
# Score: 9765.0
# 
#
#=======================================

BSNT_01133___      1 ATGGACAAAGAAACAGCGAAGCAGCGGGCAGAAGAACTGCGCCGCACCAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li      1 ATGGACAAAGAAACAGCGAAGCAGCGGGCAGAAGAACTGCGCCGCACCAT     50

BSNT_01133___     51 CAACAAGTATAGCTATGAATATTACACCCTAGATGAACCGAGCGTCCCTG    100
                     ||||||||||||||||||||||||||||.|||||||||||||||||||.|
BSU06620___li     51 CAACAAGTATAGCTATGAATATTACACCTTAGATGAACCGAGCGTCCCAG    100

BSNT_01133___    101 ATGCGGAATATGACAGATTGATGCAGGAGCTGATCGCGATCGAGGAGGAG    150
                     ||||.|||||.|||||||||||||||||||||||||||||||||||||||
BSU06620___li    101 ATGCCGAATACGACAGATTGATGCAGGAGCTGATCGCGATCGAGGAGGAG    150

BSNT_01133___    151 CATCCAGATCTCAGAACGCCTGACTCTCCTACGCAGCGCGTCGGCGGAGC    200
                     ||.|||||.|||||||||||||||||||||||||||||||||||||||||
BSU06620___li    151 CACCCAGACCTCAGAACGCCTGACTCTCCTACGCAGCGCGTCGGCGGAGC    200

BSNT_01133___    201 CGTGCTTGAAGCGTTTCAAAAAGTCACCCACGGCACACCGATGCTCAGTC    250
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU06620___li    201 CGTGCTTGAAGCGTTTCAGAAAGTCACCCACGGCACACCGATGCTCAGTC    250

BSNT_01133___    251 TGGGCAACGCCTTTAATGCTGATGATCTTCGTGATTTCGACCGCCGTGTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li    251 TGGGCAACGCCTTTAATGCTGATGATCTTCGTGATTTCGACCGCCGTGTG    300

BSNT_01133___    301 CGCCAAGCCGTCGGTGACGATGTGGCGTATAATGTGGAGCTGAAAATAGA    350
                     |||||..|||||||.|||||||||||||||||||||||||||||||||||
BSU06620___li    301 CGCCAGTCCGTCGGCGACGATGTGGCGTATAATGTGGAGCTGAAAATAGA    350

BSNT_01133___    351 CGGTCTTGCTGTTTCTCTCCGTTATGAAGACGGCTATTTTGTCAGAGGGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li    351 CGGTCTTGCTGTTTCTCTCCGTTATGAAGACGGCTATTTTGTCAGAGGGG    400

BSNT_01133___    401 CCACCCGAGGTGACGGAACGACGGGAGAGGATATTACGGAGAATCTGAAG    450
                     ||||..||||||||||.|||||||||||||||||.|||||||||||||||
BSU06620___li    401 CCACAAGAGGTGACGGGACGACGGGAGAGGATATCACGGAGAATCTGAAG    450

BSNT_01133___    451 ACGATTCGCAATATCCCCCTCAAAATGAACCGTGAGCTGTCGATCGAAGT    500
                     |||||.||||||||||||||.|||||||||||||||||||||||||||||
BSU06620___li    451 ACGATCCGCAATATCCCCCTTAAAATGAACCGTGAGCTGTCGATCGAAGT    500

BSNT_01133___    501 GCGCGGCGAGGCGTATATGCCGAAGCGTTCGTTTGAAGCACTCAATGAGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li    501 GCGCGGCGAGGCGTATATGCCGAAGCGTTCGTTTGAAGCACTCAATGAGG    550

BSNT_01133___    551 AACGGATTAAAAATGAGGAAGAACCGTTCGCCAATCCGCGAAATGCCGCG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li    551 AACGGATTAAAAATGAGGAAGAACCGTTCGCCAATCCGCGAAATGCCGCG    600

BSNT_01133___    601 GCGGGATCACTTAGGCAGCTCGATCCGAAAATTGCAGCGAAACGAAACCT    650
                     ||||||||.||.||.|||||||||||||||||||||||||||||||||||
BSU06620___li    601 GCGGGATCTCTCAGACAGCTCGATCCGAAAATTGCAGCGAAACGAAACCT    650

BSNT_01133___    651 CGATATCTTCGTCTACAGTATAGCGGAGCTTGACGAGATGGGTGTGGAGA    700
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU06620___li    651 CGATATCTTCGTCTACAGTATAGCGGAGCTTGACGAGATGGGTGTAGAGA    700

BSNT_01133___    701 CGCAAAGCCAAGGGCTTGATTTTCTCGACGAACTCGGATTTAAAACGAAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li    701 CGCAAAGCCAAGGGCTTGATTTTCTCGACGAACTCGGATTTAAAACGAAT    750

BSNT_01133___    751 CAGGAACGAAAAAAATGCGGCGACATAGAAGAAGTCATTACGCTGATCGA    800
                     |||||||||||||||||||||..|||||||||||||||||||||||||||
BSU06620___li    751 CAGGAACGAAAAAAATGCGGCAGCATAGAAGAAGTCATTACGCTGATCGA    800

BSNT_01133___    801 TGAGCTTCAGGCGAAGCGCGCTGACCTGCCGTATGAAATAGACGGCATTG    850
                     |||||||||||||||||||||.|||||||||||.||||||||||||||||
BSU06620___li    801 TGAGCTTCAGGCGAAGCGCGCGGACCTGCCGTACGAAATAGACGGCATTG    850

BSNT_01133___    851 TTATTAAAGTCGATTCTCTCGATCAACAGGAGGAGCTCGGTTTTACGGCG    900
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li    851 TCATTAAAGTCGATTCTCTCGATCAACAGGAGGAGCTCGGTTTTACGGCG    900

BSNT_01133___    901 AAAAGCCCGCGCTGGGCCATCGCGTATAAGTTTCCTGCTGAAGAGGTCGT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li    901 AAAAGCCCGCGCTGGGCCATCGCGTATAAGTTTCCTGCTGAAGAGGTCGT    950

BSNT_01133___    951 GACGAAGCTTCTCGATATCGAATTAAATGTCGGCAGAACGGGTGTGATCA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU06620___li    951 GACGAAGCTTCTCGATATCGAATTAAATGTCGGCAGAACGGGTGTGATTA   1000

BSNT_01133___   1001 CGCCGACCGCGATTCTTGAGCCGGTAAAAGTTGCCGGCACAACGGTCTCA   1050
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1001 CGCCGACTGCGATTCTTGAGCCGGTAAAAGTTGCCGGCACAACGGTCTCA   1050

BSNT_01133___   1051 AGAGCATCCCTTCATAACGAAGATTTAATTAAAGAGAAGGACATTCGGAT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1051 AGAGCATCCCTTCATAACGAAGATTTAATTAAAGAGAAGGACATTCGGAT   1100

BSNT_01133___   1101 TTTGGATAAGGTTGTCGTCAAAAAAGCGGGCGATATCATCCCGGAAGTTG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1101 TTTGGATAAGGTTGTCGTCAAAAAAGCGGGCGATATCATCCCGGAAGTTG   1150

BSNT_01133___   1151 TGAATGTCCTCGTTGAACAGCGCACAGGAGAAGAAAAGGAATTCAGCATG   1200
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU06620___li   1151 TGAATGTCCTCGTTGACCAGCGCACAGGAGAAGAAAAGGAATTCAGCATG   1200

BSNT_01133___   1201 CCGACGGAATGTCCTGAATGCGGCAGTGAACTCGTCCGGATCGAAGGAGA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1201 CCGACGGAATGTCCTGAATGCGGCAGTGAACTCGTCCGGATCGAAGGAGA   1250

BSNT_01133___   1251 AGTGGCGCTTCGCTGCATTAACCCTGAATGTCCGGCGCAAATCCGGGAAG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1251 AGTGGCGCTTCGCTGCATTAACCCTGAATGTCCGGCGCAAATCCGGGAAG   1300

BSNT_01133___   1301 GGCTTATCCATTTCGTTTCCCGCAATGCCATGAACATTGATGGGCTCGGC   1350
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU06620___li   1301 GGCTTATCCATTTCGTTTCCCGGAATGCCATGAACATTGATGGGCTCGGC   1350

BSNT_01133___   1351 GAACGAGTGATCACACAGCTGTTTGAGGAAAACCTTGTCCGCAATGTGGC   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1351 GAACGAGTGATCACACAGCTGTTTGAGGAAAACCTTGTCCGCAATGTGGC   1400

BSNT_01133___   1401 AGATTTATATAAGCTGACGAAGGAACGAGTCATCCAGCTCGAGCGCATGG   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1401 AGATTTATATAAGCTGACGAAGGAACGAGTCATCCAGCTCGAGCGCATGG   1450

BSNT_01133___   1451 GCGAAAAGTCCACTGAAAACCTGATCAGCTCCATCCAAAAATCAAAAGAA   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1451 GCGAAAAGTCCACTGAAAACCTGATCAGCTCCATCCAAAAATCAAAAGAA   1500

BSNT_01133___   1501 AATTCGTTAGAGCGCCTGCTGTTTGGGCTTGGCATCCGTTTTATCGGATC   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1501 AATTCGTTAGAGCGCCTGCTGTTTGGGCTTGGCATCCGTTTTATCGGATC   1550

BSNT_01133___   1551 AAAGGCCGCAAAGACGCTTGCCATGCATTTTGAAAGCTTGGAGAACCTGA   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1551 AAAGGCCGCAAAGACGCTTGCCATGCATTTTGAAAGCTTGGAGAACCTGA   1600

BSNT_01133___   1601 AAAAAGCCTCTAAAGAGGAACTTCTCGCGGTAGATGAAATCGGTGAAAAA   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1601 AAAAAGCCTCTAAAGAGGAACTTCTCGCGGTAGATGAAATCGGTGAAAAA   1650

BSNT_01133___   1651 ATGGCTGATGCTGTGATCACCTATTTTCATAAAGAAGAAATGCTTGAACT   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1651 ATGGCTGATGCTGTGATCACCTATTTTCATAAAGAAGAAATGCTTGAACT   1700

BSNT_01133___   1701 CTTGAATGAACTTCAGGAGCTGGGCGTAAACACGCTCTACAAAGGCCCGA   1750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1701 CTTGAATGAACTTCAGGAGCTGGGCGTAAACACGCTCTACAAAGGCCCGA   1750

BSNT_01133___   1751 AAAAAGTAAAAGCAGAGGACAGCGACTCTTACTTTGCCGGTAAAACAATT   1800
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU06620___li   1751 AAAAAGTAAAAGCAGAGGACAGCGACTCTTACTTTGCTGGTAAAACAATT   1800

BSNT_01133___   1801 GTTCTGACAGGAAAGCTGGAAGAGCTGTCAAGAAACGAAGCCAAAGCGCA   1850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1801 GTTCTGACAGGAAAGCTGGAAGAGCTGTCAAGAAACGAAGCCAAAGCGCA   1850

BSNT_01133___   1851 AATCGAAGCGCTGGGCGGAAAGCTGACTGGAAGCGTCAGCAAAAACACAG   1900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1851 AATCGAAGCGCTGGGCGGAAAGCTGACTGGAAGCGTCAGCAAAAACACAG   1900

BSNT_01133___   1901 ACTTAGTCATCGCCGGAGAAGCGGCGGGAAGCAAGCTGACAAAAGCACAA   1950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1901 ACTTAGTCATCGCCGGAGAAGCGGCGGGAAGCAAGCTGACAAAAGCACAA   1950

BSNT_01133___   1951 GAGCTGAACATTGAAGTGTGGAATGAAGAACAGTTAATGGGAGAGCTAAA   2000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06620___li   1951 GAGCTGAACATTGAAGTGTGGAATGAAGAACAGTTAATGGGAGAGCTAAA   2000

BSNT_01133___   2001 GAAATAA   2007
                     |||||||
BSU06620___li   2001 GAAATAA   2007


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