Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01132 and BSU06610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:44
# Commandline: needle
# -asequence dna-align/BSNT_01132___pcrA.1.22522.seq
# -bsequence dna-align/BSU06610___pcrA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01132___pcrA-BSU06610___pcrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01132___pcrA-BSU06610___pcrA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01132___pcrA
# 2: BSU06610___pcrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2220
# Identity: 2184/2220 (98.4%)
# Similarity: 2184/2220 (98.4%)
# Gaps: 0/2220 ( 0.0%)
# Score: 10776.0
#
#
#=======================================
BSNT_01132___ 1 TTGAATTATATTAGCAATCAATTACTAAGCGGTTTAAACCCCGTTCAGCA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 1 TTGAATTATATTAGCAATCAATTACTAAGCGGTTTAAACCCCGTTCAGCA 50
BSNT_01132___ 51 GGAAGCAGTCAAAACAACGGACGGGCCTCTTTTGCTGATGGCGGGAGCGG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 51 GGAAGCAGTCAAAACAACGGACGGGCCTCTTTTGCTGATGGCGGGAGCGG 100
BSNT_01132___ 101 GAAGCGGAAAGACGCGTGTCCTGACACACAGAATTGCTTATTTAATGGCA 150
|.|||||||||||||||||||||||.||.|||||||||||||||||||||
BSU06610___pc 101 GTAGCGGAAAGACGCGTGTCCTGACCCATAGAATTGCTTATTTAATGGCA 150
BSNT_01132___ 151 GAGAAGCATGTGGCGCCGTGGAACATTCTGGCGATCACATTTACAAATAA 200
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 151 GAAAAGCATGTGGCGCCGTGGAACATTCTGGCGATCACATTTACAAATAA 200
BSNT_01132___ 201 AGCGGCACGCGAAATGAAAGAACGTGTGGAAAGCATCCTTGGACCCGGCG 250
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU06610___pc 201 AGCGGCACGCGAAATGAAAGAACGTGTGGAAAGCATCCTCGGACCCGGCG 250
BSNT_01132___ 251 CGGACGATATCTGGATTTCCACATTCCACAGCATGTGCGTGCGGATCTTG 300
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU06610___pc 251 CGGACGATATCTGGATCTCCACATTCCACAGCATGTGCGTGCGGATCTTG 300
BSNT_01132___ 301 CGCAGAGATATCGACCGGATTGGGATCAACCGAAATTTCTCCATCCTTGA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 301 CGCAGAGATATCGACCGGATTGGGATCAACCGAAATTTCTCCATCCTTGA 350
BSNT_01132___ 351 TACGGGTGACCAGCTTTCAGTGATCAAGGGGATTTTGAAGGAGCGCAATC 400
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 351 TACGGCTGACCAGCTTTCAGTGATCAAGGGGATTTTGAAGGAGCGCAATC 400
BSNT_01132___ 401 TTGATCCGAAGAAGTTTGACCCGAGAAGCATCCTCGGTACGATCAGCAGT 450
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU06610___pc 401 TTGATCCGAAGAAGTTTGACCCGAGAAGCATCCTCGGCACGATCAGCAGT 450
BSNT_01132___ 451 GCGAAAAACGAATTGACCGAACCGGAGGAATTCTCTAAAGTTGCTGGCGG 500
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 451 GCAAAAAACGAATTGACCGAACCGGAGGAATTCTCTAAAGTTGCTGGCGG 500
BSNT_01132___ 501 CTACTACGATCAGGTGGTCAGCGATGTATATGCTGATTATCAGAAGAAGC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 501 CTACTACGATCAGGTGGTCAGCGATGTATATGCTGATTATCAGAAGAAGC 550
BSNT_01132___ 551 TATTGAAAAACCAGTCGCTCGATTTTGACGATTTGATTATGACGACGATT 600
|||||||||||||||||||||||||.||||||||.|||||||||||||||
BSU06610___pc 551 TATTGAAAAACCAGTCGCTCGATTTCGACGATTTAATTATGACGACGATT 600
BSNT_01132___ 601 AAACTGTTTGACCGAGTGCCTGAAGTGCTTGAATTTTATCAGCGCAAATT 650
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU06610___pc 601 AAACTGTTTGACAGAGTGCCTGAAGTGCTTGAATTTTATCAGCGCAAATT 650
BSNT_01132___ 651 CCAGTACATCCATGTTGATGAGTATCAGGATACGAACAGGGCGCAATACA 700
||||||||||||.|||||||||||||||||||||||||||||.|||||||
BSU06610___pc 651 CCAGTACATCCACGTTGATGAGTATCAGGATACGAACAGGGCACAATACA 700
BSNT_01132___ 701 TGCTCGTTAAGCAGCTTGCCGAGCGTTTCCAGAACCTTTGCGTTGTCGGG 750
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU06610___pc 701 TGCTCGTTAAGCAGCTTGCCGAGCGTTTCCAGAACCTTTGCGTTGTGGGG 750
BSNT_01132___ 751 GATTCTGATCAGTCAATCTACAGATGGCGCGGCGCGGATATCACCAACAT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 751 GATTCTGATCAGTCAATCTACAGATGGCGCGGCGCGGATATCACCAACAT 800
BSNT_01132___ 801 CCTTTCATTTGAAAAAGATTATCCGAATGCAAGCGTGATTTTGCTAGAAC 850
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 801 TCTTTCATTTGAAAAAGATTATCCGAATGCAAGCGTGATTTTGCTAGAAC 850
BSNT_01132___ 851 AAAACTATCGTTCAACGAAACGGATTTTGCGTGCGGCTAACGAGGTCATC 900
|||||||||||||||||||||||||||||||.|||||||||||||||||.
BSU06610___pc 851 AAAACTATCGTTCAACGAAACGGATTTTGCGCGCGGCTAACGAGGTCATT 900
BSNT_01132___ 901 AAAAACAACTCTAACCGCAAACCGAAAAATTTGTGGACGGAAAACGATGA 950
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU06610___pc 901 AAAAACAACTCTAACCGCAAACCGAAAAATTTGTGGACGGAAAATGATGA 950
BSNT_01132___ 951 AGGCATAAAAATTTCCTATTATCGCGGTGATAATGAATTCGGAGAAGGAC 1000
||||||.||.||||||||||||||||||||||||||.|||||.|||||||
BSU06610___pc 951 AGGCATCAAGATTTCCTATTATCGCGGTGATAATGAGTTCGGTGAAGGAC 1000
BSNT_01132___ 1001 AGTTTGTGGCCGGTAAAATTCATCAGCTTCACAGCTCAGGCAAGCGGAAG 1050
|||||||||||||.|||||||||||||||||||||.||||||||||||||
BSU06610___pc 1001 AGTTTGTGGCCGGCAAAATTCATCAGCTTCACAGCACAGGCAAGCGGAAG 1050
BSNT_01132___ 1051 CTGTCTGATATCGCCATATTATACCGGACAAACGCGCAGTCCCGTGTGAT 1100
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 1051 CTGTCGGATATCGCCATATTATACCGGACAAACGCGCAGTCCCGTGTGAT 1100
BSNT_01132___ 1101 TGAGGAAACGCTTCTCAAAGCGGGCTTGAACTATAACATTGTCGGCGGCA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 1101 TGAGGAAACGCTTCTCAAAGCGGGCTTGAACTATAACATTGTCGGCGGCA 1150
BSNT_01132___ 1151 CAAAGTTCTATGACAGAAAAGAAATTAAAGACATTCTTGCGTACCTGCGC 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 1151 CAAAGTTCTATGACAGAAAAGAAATTAAAGACATTCTTGCGTACCTGCGC 1200
BSNT_01132___ 1201 CTCGTATCCAATCCGGATGACGATATCAGTTTCACGCGCATTGTCAATGT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 1201 CTCGTATCCAATCCGGATGACGATATCAGTTTCACGCGCATTGTCAATGT 1250
BSNT_01132___ 1251 GCCGAAGCGCGGAGTCGGCGCGACATCACTTGAAAAAATCGCTTCGTATG 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 1251 GCCGAAGCGCGGAGTCGGCGCGACATCACTTGAAAAAATCGCTTCGTATG 1300
BSNT_01132___ 1301 CGGCCATAAACGGCTTGTCCTTTTTCCAAGCGATTCAGCAGGTTGATTTT 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 1301 CGGCCATAAACGGCTTGTCCTTTTTCCAAGCGATTCAGCAGGTTGATTTT 1350
BSNT_01132___ 1351 ATCGGCGTCAGTGCCAAAGCGGCAAACGCGCTTGACAGCTTTAGACAGAT 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 1351 ATCGGCGTCAGTGCCAAAGCGGCAAACGCGCTTGACAGCTTTAGACAGAT 1400
BSNT_01132___ 1401 GATTGAAAACCTGACCAATATGCAGGATTACTTATCCATTACAGAGCTGA 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 1401 GATTGAAAACCTGACCAATATGCAGGATTACTTATCCATTACAGAGCTGA 1450
BSNT_01132___ 1451 CAGAAGAAATTCTTGATAAGACGGAATACAGAGAAATGCTGAAGGCTGAG 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 1451 CAGAAGAAATTCTTGATAAGACGGAATACAGAGAAATGCTGAAGGCTGAG 1500
BSNT_01132___ 1501 AAATCGATCGAAGCCCAAAGCCGTTTAGAAAATATCGACGAGTTCCTGTC 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 1501 AAATCGATCGAAGCCCAAAGCCGTTTAGAAAATATCGACGAGTTCCTGTC 1550
BSNT_01132___ 1551 TGTTACGAAAAACTTTGAACAGAAAAGTGAAGACAAGACACTCGTTGCGT 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 1551 TGTTACGAAAAACTTTGAACAGAAAAGTGAAGACAAGACACTCGTTGCGT 1600
BSNT_01132___ 1601 TCCTGACAGACTTGGCATTGATCGCAGATATTGATCAGCTCGATCAGCAG 1650
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU06610___pc 1601 TCCTGACAGACTTGGCATTGATCGCAGATATTGATCAGCTCGATCAGAAG 1650
BSNT_01132___ 1651 GAGGAAGAGTCAGGCGGCAAGGATGCGATCACCCTGATGACACTGCACGC 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 1651 GAGGAAGAGTCAGGCGGCAAGGATGCGATCACCCTGATGACACTGCACGC 1700
BSNT_01132___ 1701 CGCGAAAGGACTGGAGTTCCCGGTTGTTTTCTTGATGGGGCTTGAAGAAG 1750
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU06610___pc 1701 CGCGAAAGGACTGGAGTTTCCGGTTGTTTTCTTGATGGGGCTTGAAGAAG 1750
BSNT_01132___ 1751 GCGTCTTCCCGCACAGCCGTTCACTCATGGAGGAAGCGGAAATGGAAGAA 1800
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU06610___pc 1751 GCGTCTTCCCGCATAGCCGTTCACTCATGGAGGAAGCGGAAATGGAAGAA 1800
BSNT_01132___ 1801 GAACGCCGCCTTGCGTACGTTGGGATTACAAGGGCTGAACAGGAGCTTTA 1850
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU06610___pc 1801 GAACGCCGCCTTGCGTACGTTGGGATTACAAGGGCGGAACAGGAGCTTTA 1850
BSNT_01132___ 1851 TCTGACCAATGCTAAAATGCGCACCTTGTTTGGCCGGACAAATATGAACC 1900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 1851 TCTGACCAATGCTAAAATGCGCACCTTGTTTGGCCGGACAAATATGAACC 1900
BSNT_01132___ 1901 CGGAATCTCGCTTCATTGCTGAAATACCGGATGATTTATTGGAAAACCTA 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 1901 CGGAATCTCGCTTCATTGCTGAAATACCGGATGATTTATTGGAAAACCTA 1950
BSNT_01132___ 1951 AATGAGAAAAAAGAAACGAGAGCGACGTCTGCGAGAAAAATGCAGCCGAG 2000
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU06610___pc 1951 AATGAGAAAAAAGAAACAAGAGCGACGTCTGCGAGAAAAATGCAGCCGAG 2000
BSNT_01132___ 2001 ACGCGGCCCTGTTTCACGCCCCGTATCCTACGCCAGCAAAACAGGCGGCG 2050
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU06610___pc 2001 ACGCGGCCCTGTTTCACGCCCGGTATCCTACGCCAGCAAAACAGGCGGCG 2050
BSNT_01132___ 2051 ACACCTTAAACTGGGCAGTCGGAGATAAGGCGGGCCATAAAAAATGGGGA 2100
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU06610___pc 2051 ACACCTTGAACTGGGCAGTCGGAGATAAGGCGGGCCATAAAAAATGGGGA 2100
BSNT_01132___ 2101 ACAGGAACTGTCGTCAGCGTGAAAGGCGAAGGAGAAGGGACGGAGCTCGA 2150
|||||||||||||||||||||||||||||||||||||||||.|||||.||
BSU06610___pc 2101 ACAGGAACTGTCGTCAGCGTGAAAGGCGAAGGAGAAGGGACAGAGCTTGA 2150
BSNT_01132___ 2151 TATTGCCTTCCCGAGCCCTGTTGGCGTGAAACGCCTGTTAGCAGCATTTG 2200
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU06610___pc 2151 TATTGCCTTCCCGAGCCCTGTCGGCGTGAAACGCCTGTTAGCAGCATTTG 2200
BSNT_01132___ 2201 CTCCTATTGAAAAGCAGTAA 2220
||||||||||||||||||||
BSU06610___pc 2201 CTCCTATTGAAAAGCAGTAA 2220
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