Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_01127 and BSU06580

See Amino acid alignment / Visit BSNT_01127 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:43
# Commandline: needle
#    -asequence dna-align/BSNT_01127___yerC.1.22522.seq
#    -bsequence dna-align/BSU06580___yerC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01127___yerC-BSU06580___yerC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01127___yerC-BSU06580___yerC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01127___yerC
# 2: BSU06580___yerC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:     312/315 (99.0%)
# Similarity:   312/315 (99.0%)
# Gaps:           0/315 ( 0.0%)
# Score: 1548.0
# 
#
#=======================================

BSNT_01127___      1 ATGCAAATCGATAAATTACGCGGCAAAGAGCTGGACCAGTTATTTAACTC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06580___ye      1 ATGCAAATCGATAAATTACGCGGCAAAGAGCTGGACCAGTTATTTAACTC     50

BSNT_01127___     51 GATCTTATCGCTGAAAGACCTGGAGGAATGTTACCGATTCTTCGATGATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06580___ye     51 GATCTTATCGCTGAAAGACCTGGAGGAATGTTACCGATTCTTCGATGATC    100

BSNT_01127___    101 TATGCACAATTAACGAAATTCAATCGCTGGCTCAGCGCCTTGAAGTGGCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06580___ye    101 TATGCACAATTAACGAAATTCAATCGCTGGCTCAGCGCCTTGAAGTGGCG    150

BSNT_01127___    151 CGCATGCTTCGCGAAGGAAACACGTATCATAAGATTGAAACAGAAACAGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06580___ye    151 CGCATGCTTCGCGAAGGAAACACGTATCATAAGATTGAAACAGAAACAGG    200

BSNT_01127___    201 CGCTTCCACGGCTACGATTTCCCGTGTGAAACGCTGCTTAAATTACGGGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU06580___ye    201 CGCTTCCACGGCTACGATTTCCCGTGTGAAACGCTGCTTAAATTACGGAA    250

BSNT_01127___    251 ATGACGCTTATGAAATGGCGCTTGACCGTGTGAAGGAGAATGAAACAGAG    300
                     |||||||||||||||||||||||||||||||||||||||..|||||||||
BSU06580___ye    251 ATGACGCTTATGAAATGGCGCTTGACCGTGTGAAGGAGACGGAAACAGAG    300

BSNT_01127___    301 TCTTCTTCCAAATAA    315
                     |||||||||||||||
BSU06580___ye    301 TCTTCTTCCAAATAA    315


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.