Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01078 and BSU06280

See Amino acid alignment / Visit BSNT_01078 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:37
# Commandline: needle
#    -asequence dna-align/BSNT_01078___ydjP.1.22522.seq
#    -bsequence dna-align/BSU06280___ydjP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01078___ydjP-BSU06280___ydjP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01078___ydjP-BSU06280___ydjP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01078___ydjP
# 2: BSU06280___ydjP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 816
# Identity:     804/816 (98.5%)
# Similarity:   804/816 (98.5%)
# Gaps:           0/816 ( 0.0%)
# Score: 3972.0
# 
#
#=======================================

BSNT_01078___      1 ATGCCATACATCACATTAGAAGATCAGACACGCCTTTACTATGAAACACA     50
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU06280___yd      1 ATGCCATACATCATATTAGAAGATCAGACACGCCTTTACTATGAAACACA     50

BSNT_01078___     51 CGGGAGCGGGACGCCGATCCTGTTTATACATGGGGTGCTGATGAGCGGAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06280___yd     51 CGGGAGCGGGACGCCGATCCTGTTTATACATGGGGTGCTGATGAGCGGAC    100

BSNT_01078___    101 AATTTTTCCACAAACAATTTTCGGCGCTTTCTGCCAATTATCAATGTATT    150
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU06280___yd    101 AATTTTTCCACAAACAATTTTCGGTGCTTTCTGCCAATTATCAATGTATT    150

BSNT_01078___    151 CGTCTTGATCTTAGAGGACACGGCGAATCTGACAAAGTGCTTCACGGCCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06280___yd    151 CGTCTTGATCTTAGAGGACACGGCGAATCTGACAAAGTGCTTCACGGCCA    200

BSNT_01078___    201 CACCATTTCCCAATATGCCCGTGACATAAGGGAATTTCTAAATGCAATAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU06280___yd    201 CACCATTTCCCAATATGCCCGTGACATAAGGGAATTTCTAAATGCAATGG    250

BSNT_01078___    251 AGCTTGACCATGTCGTTCTTGCCGGCTGGTCAATGGGCGCTTTTGTCGTA    300
                     |||||||.|||||||||||||||||||||||||||||.||||||||||||
BSU06280___yd    251 AGCTTGATCATGTCGTTCTTGCCGGCTGGTCAATGGGTGCTTTTGTCGTA    300

BSNT_01078___    301 TGGGATTATCTCAATCAATTTGGGAATGATAACATTCAAGCCGCTGTGAT    350
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU06280___yd    301 TGGGATTATCTCAATCAGTTTGGGAATGATAACATTCAAGCCGCTGTGAT    350

BSNT_01078___    351 CATCGATCAATCTGCTTCCGACTATCAATGGGAGGGCTGGGAACACGGTC    400
                     ||||||||||||.|||||.||||||||||||||||||||||||||.||||
BSU06280___yd    351 CATCGATCAATCCGCTTCGGACTATCAATGGGAGGGCTGGGAACATGGTC    400

BSNT_01078___    401 CATTTGATTTTGACGGCTTAAAAACAGCGATGCACGCCATTCAAACTGAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06280___yd    401 CATTTGATTTTGACGGCTTAAAAACAGCGATGCACGCCATTCAAACTGAC    450

BSNT_01078___    451 CCGCTGCCTTTCTACGAAAGCTTCATCCAAAATATGTTCTCAGAACCGCC    500
                     |||||||||||||||||||||||||||||.|||||||||.||||||||||
BSU06280___yd    451 CCGCTGCCTTTCTACGAAAGCTTCATCCAGAATATGTTCGCAGAACCGCC    500

BSNT_01078___    501 TGCCGAGACCGAAACAGAATGGATGCTGGCAGAAATCCTCAAACAGCCGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06280___yd    501 TGCCGAGACCGAAACAGAATGGATGCTGGCAGAAATCCTCAAACAGCCGG    550

BSNT_01078___    551 CTGCCATTTCTAGCACGATTTTATTTAACCAAACGGCCGCTGATTACCGG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06280___yd    551 CTGCCATTTCTAGCACGATTTTATTTAACCAAACGGCCGCTGATTACCGG    600

BSNT_01078___    601 GGCACCCTCCAAAACATCAATGTGCCGACATTGCTGTGCTTCGGGGAAGA    650
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU06280___yd    601 GGCACCCTCCAAAACATCAATGTGCCGGCATTGCTGTGCTTCGGGGAAGA    650

BSNT_01078___    651 CAAGAAATTTTTCTCTACAGCAGCTGGGGAACACTTGCGCAGCAATATTC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06280___yd    651 CAAGAAATTTTTCTCTACAGCAGCTGGGGAACACTTGCGCAGCAATATTC    700

BSNT_01078___    701 CAAACGCGACACTCGTTACCTTTCCTAAAAGCAGCCATTGCCCGTTTTTA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06280___yd    701 CAAACGCGACACTCGTTACCTTTCCTAAAAGCAGCCATTGCCCGTTTTTA    750

BSNT_01078___    751 GAAGAGCCAGATGCTTTTAACAGCACACTCCTCTCCTTTTTAGATGGGGT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06280___yd    751 GAAGAGCCAGATGCTTTTAACAGCACACTCCTCTCCTTTTTAGATGGGGT    800

BSNT_01078___    801 TATTGGAAAGTCATAA    816
                     ||||||||||||||||
BSU06280___yd    801 TATTGGAAAGTCATAA    816


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