Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01070 and BSU06240

See Amino acid alignment / Visit BSNT_01070 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:36
# Commandline: needle
#    -asequence dna-align/BSNT_01070___ydjL.1.22522.seq
#    -bsequence dna-align/BSU06240___bdhA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01070___ydjL-BSU06240___bdhA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01070___ydjL-BSU06240___bdhA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01070___ydjL
# 2: BSU06240___bdhA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1041
# Identity:    1037/1041 (99.6%)
# Similarity:  1037/1041 (99.6%)
# Gaps:           0/1041 ( 0.0%)
# Score: 5169.0
# 
#
#=======================================

BSNT_01070___      1 ATGAAGGCAGCAAGATGGCATAACCAAAAGGATATCCGTATTGAACATAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd      1 ATGAAGGCAGCAAGATGGCATAACCAAAAGGATATCCGTATTGAACATAT     50

BSNT_01070___     51 CGAAGAGCCAAAAACGGAGCCGGGAAAAGTAAAGATCAAAGTCAAATGGT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd     51 CGAAGAGCCAAAAACGGAGCCGGGAAAAGTAAAGATCAAAGTCAAATGGT    100

BSNT_01070___    101 GCGGCATCTGCGGAAGTGATTTACACGAATATCTGGGCGGCCCGATCTTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    101 GCGGCATCTGCGGAAGTGATTTACACGAATATCTGGGCGGCCCGATCTTT    150

BSNT_01070___    151 ATTCCGGTTGACAAACCGCACCCATTAACAAATGAAACGGCACCTGTCAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    151 ATTCCGGTTGACAAACCGCACCCATTAACAAATGAAACGGCACCTGTCAC    200

BSNT_01070___    201 AATGGGGCATGAATTCTCCGGTGAAGTTGTCGAAGTCGGAGAAGGCGTTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    201 AATGGGGCATGAATTCTCCGGTGAAGTTGTCGAAGTCGGAGAAGGCGTTG    250

BSNT_01070___    251 AAAATTATAAAGTTGGAGACCGCGTTGTAGTCGAGCCGATTTTTGCTACA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    251 AAAATTATAAAGTTGGAGACCGCGTTGTAGTCGAGCCGATTTTTGCTACA    300

BSNT_01070___    301 CACGGCCACCAAGGCGCCTACAACCTTGATGAACAAATGGGATTCCTCGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    301 CACGGCCACCAAGGCGCCTACAACCTTGATGAACAAATGGGATTCCTCGG    350

BSNT_01070___    351 CTTAGCCGGCGGAGGCGGCGGTTTCTCTGAATACGTCTCTGTGGATGAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    351 CTTAGCCGGCGGAGGCGGCGGTTTCTCTGAATACGTCTCTGTGGATGAAG    400

BSNT_01070___    401 AGCTTTTGTTCAAACTTCCTGATGAATTATCATATGAACAAGGCGCGCTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    401 AGCTTTTGTTCAAACTTCCTGATGAATTATCATATGAACAAGGCGCGCTC    450

BSNT_01070___    451 GTTGAACCTTCTGCAGTTGCTCTATACGCTGTCCGCTCAAGCAAACTCAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    451 GTTGAACCTTCTGCAGTTGCTCTATACGCTGTCCGCTCAAGCAAACTCAA    500

BSNT_01070___    501 AGCAGGCGACAAAGCAGCTGTATTCGGCTGCGGCCCGATCGGACTTCTTG    550
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU06240___bd    501 AGCAGGCGACAAAGCGGCTGTATTCGGCTGCGGCCCGATCGGACTTCTTG    550

BSNT_01070___    551 TCATTGAAGCGCTGAAGGCTGCCGGTGCAACTGATATTTACGCTGTTGAG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    551 TCATTGAAGCGCTGAAGGCTGCCGGTGCAACTGATATTTACGCTGTTGAG    600

BSNT_01070___    601 CTTTCTCCTGAACGCCAGCAAAAAGCTGAGGAGCTTGGCGCGATCATCGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    601 CTTTCTCCTGAACGCCAGCAAAAAGCTGAGGAGCTTGGCGCGATCATCGT    650

BSNT_01070___    651 AGATCCGTCTAAAACAGACGATGTAGTCGCTGAGATTGCAGAACGTACAG    700
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    651 TGATCCGTCTAAAACAGACGATGTAGTCGCTGAGATTGCAGAACGTACAG    700

BSNT_01070___    701 GAGGCGGTGTTGACGTAGCATTCGAAGTCACTGGTGTCCCAGTGGTGTTA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    701 GAGGCGGTGTTGACGTAGCATTCGAAGTCACTGGTGTCCCAGTGGTGTTA    750

BSNT_01070___    751 CGACAAGCCATCCAGTCCACTACAATTGCCGGTGAAACCGTCATCGTCAG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    751 CGACAAGCCATCCAGTCCACTACAATTGCCGGTGAAACCGTCATCGTCAG    800

BSNT_01070___    801 CATTTGGGAAAAAGGTGCTGAAATCCATCCGAACGATATCGTAATCAAAG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    801 CATTTGGGAAAAAGGTGCTGAAATCCATCCGAACGATATCGTAATCAAAG    850

BSNT_01070___    851 AACGTACAGTAAAAGGAATTATCGGATACCGCGACATCTTCCCGGCTGTA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    851 AACGTACAGTAAAAGGAATTATCGGATACCGCGACATCTTCCCGGCTGTA    900

BSNT_01070___    901 TTGTCATTAATGAAAGAAGGCTATTTCTCAGCTGACAAACTCGTAACGAA    950
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU06240___bd    901 TTGTCATTAATGAAAGAAGGCTATTTCTCAGCCGACAAACTCGTAACGAA    950

BSNT_01070___    951 AAAAATCGTACTAGATGATTTGATCGAGGAAGGCTTCGGGGCTCTTATTA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06240___bd    951 AAAAATCGTACTAGATGATTTGATCGAGGAAGGCTTCGGGGCTCTTATTA   1000

BSNT_01070___   1001 AAGAGAAAAGCCAAGTCAAAATCCTTGTCAGACCTAACTAA   1041
                     ||||||||||||||||||||||||||||.||||||||||||
BSU06240___bd   1001 AAGAGAAAAGCCAAGTCAAAATCCTTGTTAGACCTAACTAA   1041


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01070 and BSU06240

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
