Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01066 and BSU06220

See Amino acid alignment / Visit BSNT_01066 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:36
# Commandline: needle
#    -asequence dna-align/BSNT_01066___ydjJ.1.22522.seq
#    -bsequence dna-align/BSU06220___ydjJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01066___ydjJ-BSU06220___ydjJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01066___ydjJ-BSU06220___ydjJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01066___ydjJ
# 2: BSU06220___ydjJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1026
# Identity:    1015/1026 (98.9%)
# Similarity:  1015/1026 (98.9%)
# Gaps:           0/1026 ( 0.0%)
# Score: 5031.0
# 
#
#=======================================

BSNT_01066___      1 ATGAATGAGGTTTATATCATTGCAGGCCTTTTATTATTGACAGCGGGGAT     50
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU06220___yd      1 ATGAATGAGGGTTATATCATTGCAGGCCTTTTATTATTGACAGCGGGGAT     50

BSNT_01066___     51 GATTGATTTTTTATGGACCACGTTATGGTTAGAGAGCGGTGCAGGCCCGA    100
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU06220___yd     51 GATTGATTTTTTATGGACCACGTTATGGTTAGAGAGCGGTGCCGGCCCGA    100

BSNT_01066___    101 TCACAAGATGCCTGTCTGCCTGGCTGTGGAAGGGCTGCCGCAAAATCAGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06220___yd    101 TCACAAGATGCCTGTCTGCCTGGCTGTGGAAGGGCTGCCGCAAAATCAGC    150

BSNT_01066___    151 GGTGACCACGCAAAGGTTCTAAGTATGGCTGGTCCTCTGCTGTTATGCCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06220___yd    151 GGTGACCACGCAAAGGTTCTAAGTATGGCTGGTCCTCTGCTGTTATGCCT    200

BSNT_01066___    201 GACGTTAGTGATATGGATCAGTCTATTTTGGGGCGGGTGGGTTTTGATTT    250
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU06220___yd    201 GACGTTAGTGATATGGATCAGTCTATTTTGGAGCGGGTGGGTTTTGATTT    250

BSNT_01066___    251 ACTCGAGTGACCCTCACTCACTTATGGAAACTCAATCAAAAGAACTGGCT    300
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU06220___yd    251 ACTCGAGTGACCCTCACTCACTTATGGAAACTCAATCAAAAGAACCGGCT    300

BSNT_01066___    301 TCCTGGTCAGACCGAATTTATTTTTCCGGCTATGTCATGTTTACATTAGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06220___yd    301 TCCTGGTCAGACCGAATTTATTTTTCCGGCTATGTCATGTTTACATTAGG    350

BSNT_01066___    351 AAATGGCGACCTCGCTCCGAACGGAGGCCTATGGAAGCTTGTCACGATTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06220___yd    351 AAATGGCGACCTCGCTCCGAACGGAGGCCTATGGAAGCTTGTCACGATTA    400

BSNT_01066___    401 TTGAAACAGCTCAAGGACTGCTTACCATCACGTTTTCTGTCACGTATTTG    450
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU06220___yd    401 TTGAAACAGCTCAAGGACTGCTTACCATCACATTTTCTGTCACGTATTTG    450

BSNT_01066___    451 ATTTCCGTCTTGAGTGCGGTTAATCAAAAACGCTCCTTTGCCCAAAGTGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06220___yd    451 ATTTCCGTCTTGAGTGCGGTTAATCAAAAACGCTCCTTTGCCCAAAGTGT    500

BSNT_01066___    501 ATTAAGTCTAGGGCATGACGGAACAGAAATCGTCCATAATGCATGGAATG    550
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU06220___yd    501 ATTAAGTCTAGGGCATGACGGAACTGAAATCGTCCATAATGCATGGAATG    550

BSNT_01066___    551 GCAAAGATTTTCACGACATTGATTTTCTTCTTGTCGCTGCCTCATCAGAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06220___yd    551 GCAAAGATTTTCACGACATTGATTTTCTTCTTGTCGCTGCCTCATCAGAA    600

BSNT_01066___    601 CTGGGAAAGCTGACCGCTCAGCATAACGCCTTCCCCATCCTTCATTTTTA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06220___yd    601 CTGGGAAAGCTGACCGCTCAGCATAACGCCTTCCCCATCCTTCATTTTTA    650

BSNT_01066___    651 CCACAGCACGCAGCATCAGGAATCATCCATTATAGCTGTTGCTGTATTGG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06220___yd    651 CCACAGCACGCAGCATCAGGAATCATCCATTATAGCTGTTGCTGTATTGG    700

BSNT_01066___    701 ATGAAGCTCTAACCATTTTCAAATACGGAATTCCTGAACAATATCAGCCG    750
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU06220___yd    701 ATGAGGCTCTAACCATTTTCAAATACGGAATTCCTGAACAATATCAGCCG    750

BSNT_01066___    751 AATCAGCTTCATATCAAAGAAGCGCGCTCAAGTATCAAAAACTATCTAGA    800
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU06220___yd    751 AATCAGCTTCATATCAAAGAAGCGCGCTCAAGTATCAAAAACTATCTGGA    800

BSNT_01066___    801 TACCGTTCATACTGCCTATATCCATCCTGCAGAACAAGCGCCGCCGGAAC    850
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU06220___yd    801 TACCGTTCATACTGCCTATATCCATCCTGCAGAACAAGCGCCGCCAGAAC    850

BSNT_01066___    851 CAGACATCTCAAAGCTTCAACAATCAGGCATACCGGCTTTATCAAAGCAA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06220___yd    851 CAGACATCTCAAAGCTTCAACAATCAGGCATACCGGCTTTATCAAAGCAA    900

BSNT_01066___    901 ACATTTCAAATTGCCGTCAATTCAATAAAGGAACGTCGTCAATTGCTGCT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06220___yd    901 ACATTTCAAATTGCCGTCAATTCAATAAAGGAACGTCGTCAATTGCTGCT    950

BSNT_01066___    951 GGGAATTATCCAAGCGGGGGCTCGAAAGTGGCCTGTTCAGGAGCAAGCAA   1000
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU06220___yd    951 GGGAATTATCCAAGCGGGGGCTCGAAAATGGCCTGTTCAGGAGCAAGCAA   1000

BSNT_01066___   1001 TAGGTAACGCTTATTCTCCTAAATAA   1026
                     |||||||.||||||||||||||||||
BSU06220___yd   1001 TAGGTAATGCTTATTCTCCTAAATAA   1026


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01066 and BSU06220

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
