Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01057 and BSU06170
See
Amino acid alignment /
Visit
BSNT_01057 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:35
# Commandline: needle
# -asequence dna-align/BSNT_01057___ydjE.1.22522.seq
# -bsequence dna-align/BSU06170___ydjE.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01057___ydjE-BSU06170___ydjE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01057___ydjE-BSU06170___ydjE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01057___ydjE
# 2: BSU06170___ydjE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 963
# Identity: 910/963 (94.5%)
# Similarity: 910/963 (94.5%)
# Gaps: 36/963 ( 3.7%)
# Score: 4482.0
#
#
#=======================================
BSNT_01057___ 1 ------------------------------------TTGATTGATTTCTT 14
||||||||||||||
BSU06170___yd 1 ATGCGTAGTCATTCTGTAGTTTGTATTGGGGAATTGTTGATTGATTTCTT 50
BSNT_01057___ 15 TTGTACCGATGTTGACGTTGATTTAATGGAAGGGCGCCATTTCCTGAAAA 64
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU06170___yd 51 TTGTACCGATGTTGACGTTGATTTAATGGAAGGGCGCCAATTCCTGAAAA 100
BSNT_01057___ 65 GTGCCGGCGGGGCACCGGCGAATGTGTCGGCAGCGATTGCCAAGCTGGGA 114
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU06170___yd 101 GTGCCGGCGGGGCACCGGCGAATGTGTCGGCAGCGATTGCCAAGCTGGGC 150
BSNT_01057___ 115 GGAGACGCCGCTTTCAGCGGAAAAGTAGGAAAGGATCCGTTTGGGTATTT 164
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd 151 GGAGACGCCGCTTTCAGCGGAAAAGTAGGAAAGGATCCGTTTGGGTATTT 200
BSNT_01057___ 165 TTTGAAGCGAACATTGGACGCTGTACATGTCGATACCTCTATGCTGGTGA 214
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd 201 TCTGAAGCGAACATTGGACGCTGTACATGTCGATACCTCTATGCTGGTGA 250
BSNT_01057___ 215 TGGATGAGAAAGCGCCTACAACGCTTGCTTTTGTTTCATTAAAACAAAAT 264
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd 251 TGGATGAGAAAGCGCCTACAACGCTTGCTTTTGTTTCATTAAAACAAAAT 300
BSNT_01057___ 265 GGAGAGCGTGACTTTGTTTTTAATAGAGGCGCGGACGCTTTGTTTACGCT 314
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd 301 GGAGAGCGTGACTTTGTTTTTAATAGAGGCGCGGACGCTTTGTTTACGCT 350
BSNT_01057___ 315 GGAGGATATTGACCAGGAAAAACTAAACGGAGCGAAAATCCTTCATTTCG 364
||||||.||||||||||||||||||||||.||||||||||||||||||||
BSU06170___yd 351 GGAGGACATTGACCAGGAAAAACTAAACGAAGCGAAAATCCTTCATTTCG 400
BSNT_01057___ 365 GCTCTGCGACGGCACTGTTATCAGATCCATTTTGCTCAGCCTATTTACGG 414
||||||||||||||||||||||.|||||.|||||||||||||||||||||
BSU06170___yd 401 GCTCTGCGACGGCACTGTTATCGGATCCGTTTTGCTCAGCCTATTTACGG 450
BSNT_01057___ 415 CTGATGTCGATTGCGAAAGACAATGGACAGTTTATTTCGTTTGACCCTAA 464
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd 451 TTGATGTCGATTGCGAAAGACAATGGACAGTTTATTTCGTTTGACCCTAA 500
BSNT_01057___ 465 CTACCGTGAAGATTTATGGAGGGGAAGAGTCTCAGAGTTTGTAAGTGTTG 514
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd 501 CTACCGTGAAGATTTATGGAGGGGAAGAGTCTCAGAGTTTGTAAGTGTTG 550
BSNT_01057___ 515 CGAAAAAAGCGATCGCTGTAAGTGATTTTGTGAAAGTCAGTGACGAGGAA 564
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd 551 CGAAAAAAGCGATCGCTGTAAGTGATTTTGTGAAAGTCAGTGACGAGGAA 600
BSNT_01057___ 565 CTTGAGATTATCAGCGGTGTGAAGGATCATGAAAAGGGTGTTGCGATCCT 614
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU06170___yd 601 CTTGAGATTATCAGCGGTGTGAAGGATCATGAAAAGGGAGTTGCGATCCT 650
BSNT_01057___ 615 TCATGAGATCGGAGCCAACATTGTCGCTGTGACACTTGGGAAAAGCGGAA 664
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd 651 TCATGAGATCGGAGCCAACATTGTCGCTGTGACACTTGGGAAAAGCGGAA 700
BSNT_01057___ 665 CGCTTCTTTCCAATGGAAAAGACCGTGAAATCATTCCAAGCATTCCGGTG 714
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd 701 CGCTTCTTTCCAATGGAAAAGACCGTGAAATCATTCCAAGCATTCCGGTG 750
BSNT_01057___ 715 ACATCAATCGATTCAACAGGGGCGGGAGATGCTTTTGTCGGTGCGGCTTT 764
||||||||.||.||||||||||||||||||||||||||||||||||||||
BSU06170___yd 751 ACATCAATTGACTCAACAGGGGCGGGAGATGCTTTTGTCGGTGCGGCTTT 800
BSNT_01057___ 765 ATATCAATTGGCAAACACGGATCAGATTCAATCTGTAGAAGCAGATTTTG 814
|||||||||||||||||||||||||||||||||||||||.||.|||||||
BSU06170___yd 801 ATATCAATTGGCAAACACGGATCAGATTCAATCTGTAGATGCTGATTTTG 850
BSNT_01057___ 815 TGAAACTGCGTGAGATTGTGGCGTTTGCCAATAAGGTCGGAGCTCTTGTG 864
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd 851 TGAAACTGCGTGAGATTGTGGCGTTTGCCAATAAGGTCGGAGCTCTTGTG 900
BSNT_01057___ 865 TGCACTAAAATGGGAGCGATTGATGCACTGCCGAGCTTGGATGAGATCGA 914
|||||||||||.|||||||||||||||||||||||.|||||||||||.|.
BSU06170___yd 901 TGCACTAAAATTGGAGCGATTGATGCACTGCCGAGTTTGGATGAGATTGG 950
BSNT_01057___ 915 AGTTTCTTTGTAA 927
|||||||||||||
BSU06170___yd 951 AGTTTCTTTGTAA 963
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.