Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01040 and BSU05970

See Amino acid alignment / Visit BSNT_01040 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:33
# Commandline: needle
#    -asequence dna-align/BSNT_01040___rex.1.22522.seq
#    -bsequence dna-align/BSU05970___ydiH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01040___rex-BSU05970___ydiH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01040___rex-BSU05970___ydiH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01040___rex
# 2: BSU05970___ydiH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 648
# Identity:     644/648 (99.4%)
# Similarity:   644/648 (99.4%)
# Gaps:           0/648 ( 0.0%)
# Score: 3204.0
# 
#
#=======================================

BSNT_01040___      1 ATGAATAAGGATCAATCAAAAATTCCGCAGGCGACGGCGAAACGGCTGCC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05970___yd      1 ATGAATAAGGATCAATCAAAAATTCCGCAGGCGACGGCGAAACGGCTGCC     50

BSNT_01040___     51 GCTTTACTATCGCTTTTTAAAGAATCTTCATGCGTCAGGAAAACAGCGTG    100
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU05970___yd     51 GCTTTACTATCGCTTTTTAAAGAATCTGCATGCGTCAGGAAAACAGCGTG    100

BSNT_01040___    101 TATCATCCGCTGAACTTAGTGATGCCGTAAAGGTTGATTCTGCCACGATT    150
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU05970___yd    101 TATCATCCGCTGAACTCAGTGATGCCGTAAAGGTTGATTCTGCCACGATT    150

BSNT_01040___    151 CGGAGGGATTTTTCCTATTTTGGAGCTCTTGGCAAAAAAGGATACGGATA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05970___yd    151 CGGAGGGATTTTTCCTATTTTGGAGCTCTTGGCAAAAAAGGATACGGATA    200

BSNT_01040___    201 TAATGTGGATTATTTGCTGTCTTTTTTCCGAAAAACGCTTGATCAGGATG    250
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU05970___yd    201 TAATGTGGATTATTTGCTGTCTTTTTTCCGGAAAACGCTTGATCAGGATG    250

BSNT_01040___    251 AGATGACAGACGTCATCTTGATTGGTGTCGGGAACTTGGGAACGGCATTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05970___yd    251 AGATGACAGACGTCATCTTGATTGGTGTCGGGAACTTGGGAACGGCATTT    300

BSNT_01040___    301 CTTCACTATAATTTCACAAAAAACAATAACACAAAAATTTCTATGGCTTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05970___yd    301 CTTCACTATAATTTCACAAAAAACAATAACACAAAAATTTCTATGGCTTT    350

BSNT_01040___    351 TGATATAAATGAGAGTAAAATAGGAACTGAGGTAGGCGGCGTGCCCGTCT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05970___yd    351 TGATATAAATGAGAGTAAAATAGGAACTGAGGTAGGCGGCGTGCCCGTCT    400

BSNT_01040___    401 ATAACCTTGATGACCTTGAACAACACGTAAAAGATGAATCAGTTGCCATT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05970___yd    401 ATAACCTTGATGACCTTGAACAACACGTAAAAGATGAATCAGTTGCCATT    450

BSNT_01040___    451 CTTACAGTGCCAGCAGTTGCCGCTCAATCCATTACAGACAGATTGGTCGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05970___yd    451 CTTACAGTGCCAGCAGTTGCCGCTCAATCCATTACAGACAGATTGGTCGC    500

BSNT_01040___    501 ATTAGGAATCAAGGGAATCCTTAATTTTACGCCGGCCCGTTTGAATGTGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05970___yd    501 ATTAGGAATCAAGGGAATCCTTAATTTTACGCCGGCCCGTTTGAATGTGC    550

BSNT_01040___    551 CGGAACACATTCGAATTCATCATATAGATTTAGCAGTTGAGCTTCAGTCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05970___yd    551 CGGAACACATTCGAATTCATCATATAGATTTAGCAGTTGAGCTTCAGTCA    600

BSNT_01040___    601 CTGGTTTATTTTTTGAAGCATTATTCAGTTTTAGAGGAAATCGAATAA    648
                     |||||||||||||||||||||||||||||||||||||||||||||||.
BSU05970___yd    601 CTGGTTTATTTTTTGAAGCATTATTCAGTTTTAGAGGAAATCGAATAG    648


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