Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01036 and BSU05940

See Amino acid alignment / Visit BSNT_01036 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:32
# Commandline: needle
#    -asequence dna-align/BSNT_01036___gcp.1.22522.seq
#    -bsequence dna-align/BSU05940___gcp.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01036___gcp-BSU05940___gcp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01036___gcp-BSU05940___gcp.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01036___gcp
# 2: BSU05940___gcp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1041
# Identity:    1038/1041 (99.7%)
# Similarity:  1038/1041 (99.7%)
# Gaps:           0/1041 ( 0.0%)
# Score: 5178.0
# 
#
#=======================================

BSNT_01036___      1 ATGAGTGAGCAAAAAGACATGTACGTATTAGGAATTGAAACAAGCTGTGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc      1 ATGAGTGAGCAAAAAGACATGTACGTATTAGGAATTGAAACAAGCTGTGA     50

BSNT_01036___     51 TGAGACTGCTGCAGCTATTGTGAAAAACGGGAAAGAGATCATTTCAAACG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc     51 TGAGACTGCTGCAGCTATTGTGAAAAACGGGAAAGAGATCATTTCAAACG    100

BSNT_01036___    101 TAGTAGCCTCTCAAATTGAAAGCCATAAGCGCTTCGGAGGCGTTGTTCCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    101 TAGTAGCCTCTCAAATTGAAAGCCATAAGCGCTTCGGAGGCGTTGTTCCG    150

BSNT_01036___    151 GAAATTGCTTCAAGACATCATGTTGAACAAATCACTTTGGTTATAGAAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    151 GAAATTGCTTCAAGACATCATGTTGAACAAATCACTTTGGTTATAGAAGA    200

BSNT_01036___    201 GGCGTTTCGCAAAGCTGGCATGACGTATAGTGATATTGATGCGATTGCAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    201 GGCGTTTCGCAAAGCTGGCATGACGTATAGTGATATTGATGCGATTGCAG    250

BSNT_01036___    251 TAACAGAAGGTCCGGGACTGGTGGGGGCGCTTCTTATTGGAGTGAATGCC    300
                     |||||||||||||||||||||||||.|||||||||||.||||||||||||
BSU05940___gc    251 TAACAGAAGGTCCGGGACTGGTGGGAGCGCTTCTTATCGGAGTGAATGCC    300

BSNT_01036___    301 GCTAAAGCATTGAGCTTTGCACATAACATTCCGTTAGTAGGCGTTCATCA    350
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU05940___gc    301 GCTAAAGCATTGAGCTTTGCATATAACATTCCGTTAGTAGGCGTTCATCA    350

BSNT_01036___    351 TATAGCCGGTCATATATACGCGAACCGTCTTGTAGAAGACATCGTGTTCC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    351 TATAGCCGGTCATATATACGCGAACCGTCTTGTAGAAGACATCGTGTTCC    400

BSNT_01036___    401 CGGCACTGGCATTGGTCGTTTCAGGAGGCCATACAGAACTGGTTTATATG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    401 CGGCACTGGCATTGGTCGTTTCAGGAGGCCATACAGAACTGGTTTATATG    450

BSNT_01036___    451 AAGGAACATGGATCATTTGAAGTCATTGGGGAAACCCTTGATGATGCGGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    451 AAGGAACATGGATCATTTGAAGTCATTGGGGAAACCCTTGATGATGCGGC    500

BSNT_01036___    501 AGGAGAAGCCTACGACAAAGTGGCGCGGACGATGGGATTGCCATATCCGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    501 AGGAGAAGCCTACGACAAAGTGGCGCGGACGATGGGATTGCCATATCCGG    550

BSNT_01036___    551 GTGGACCGCAAATTGACAAGCTAGCTGAAAAAGGGAATGACAATATTCCG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    551 GTGGACCGCAAATTGACAAGCTAGCTGAAAAAGGGAATGACAATATTCCG    600

BSNT_01036___    601 CTTCCTCGCGCATGGCTTGAAGAAGGCTCTTACAACTTCAGCTTTAGCGG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    601 CTTCCTCGCGCATGGCTTGAAGAAGGCTCTTACAACTTCAGCTTTAGCGG    650

BSNT_01036___    651 ATTGAAGTCTGCGGTGATCAATACGCTTCATAATGCATCCCAAAAAGGGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    651 ATTGAAGTCTGCGGTGATCAATACGCTTCATAATGCATCCCAAAAAGGGC    700

BSNT_01036___    701 AAGAGATTGCTCCGGAAGATTTGTCTGCCAGTTTCCAAAATAGTGTGATC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    701 AAGAGATTGCTCCGGAAGATTTGTCTGCCAGTTTCCAAAATAGTGTGATC    750

BSNT_01036___    751 GATGTCTTGGTAACCAAAACGGCGCGCGCGGCAAAGGAATATGATGTCAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    751 GATGTCTTGGTAACCAAAACGGCGCGCGCGGCAAAGGAATATGATGTCAA    800

BSNT_01036___    801 ACAGGTCCTTTTAGCCGGAGGAGTAGCTGCAAACAGAGGCCTCAGAGCTG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    801 ACAGGTCCTTTTAGCCGGAGGAGTAGCTGCAAACAGAGGCCTCAGAGCTG    850

BSNT_01036___    851 CATTAGAAAAGGAATTTGCCCAGCATGAAGGGATTACGCTTGTCATTCCT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    851 CATTAGAAAAGGAATTTGCCCAGCATGAAGGGATTACGCTTGTCATTCCT    900

BSNT_01036___    901 CCATTAGCTTTATGCACGGATAATGCTGCGATGATTGCTGCTGCTGGTAC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    901 CCATTAGCTTTATGCACGGATAATGCTGCGATGATTGCTGCTGCTGGTAC    950

BSNT_01036___    951 AATTGCTTTTGAAAAAGGAATTCGCGGTGCATATGATATGAATGGCCAGC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05940___gc    951 AATTGCTTTTGAAAAAGGAATTCGCGGTGCATATGATATGAATGGCCAGC   1000

BSNT_01036___   1001 CCGGCCTTGAATTGACTTCTTATCAAAGTCTCACGAGATAA   1041
                     |||||||||||||||||||||||||||||||||||||||||
BSU05940___gc   1001 CCGGCCTTGAATTGACTTCTTATCAAAGTCTCACGAGATAA   1041


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01036 and BSU05940

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
