Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01003 and BSU05830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:30
# Commandline: needle
# -asequence dna-align/BSNT_01003.1.22522.seq
# -bsequence dna-align/BSU05830___gmuC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01003-BSU05830___gmuC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01003-BSU05830___gmuC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01003
# 2: BSU05830___gmuC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1329
# Identity: 766/1329 (57.6%)
# Similarity: 766/1329 (57.6%)
# Gaps: 546/1329 (41.1%)
# Score: 3752.0
#
#
#=======================================
BSNT_01003 1 GTGTTCGAGAAAATCAGCCAATTCCTTGTTCCAATTGCAGGGAGGTTAAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05830___gm 1 GTGTTCGAGAAAATCAGCCAATTCCTTGTTCCAATTGCAGGGAGGTTAAA 50
BSNT_01003 51 CAATAACCGCTATTTGCAAGTGCTGCGTGATGCATTTATGCTGGCTTTCC 100
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU05830___gm 51 CAATAACCGCTATTTGCAAGTGTTGCGTGATGCATTTATGCTGGCTTTCC 100
BSNT_01003 101 CGCTTACGATATTCGGGTCCATTTTTGTCGTGTTAACGAATTTGCCGTTT 150
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU05830___gm 101 CGCTGACGATATTCGGGTCCATTTTTGTCGTGTTAACGAATTTGCCGTTT 150
BSNT_01003 151 CTAAACAAAATCATGAACGCCTCAATGCTTACATCGTTTCAGTCTCATTT 200
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU05830___gm 151 CTAAACAAAATCATGAACGCCTCAATGCTTACGTCGTTTCAGTCTCATTT 200
BSNT_01003 201 CGGCATTGCCTCCACGGCGACTATGGGCATTATGTCTGTCTTTGTTGTGT 250
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU05830___gm 201 CGGCATTGCCTCCACGGCGACAATGGGCATTATGTCTGTCTTTGTTGTGT 250
BSNT_01003 251 TCGGGATAGGCTATTACCTGTCAAAAAGCTATCAGGTCGAAGCTGTATTT 300
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU05830___gm 251 TCGGGATAGGCTATTACCTGTCGAAAAGCTATCAGGTCGAAGCTGTATTT 300
BSNT_01003 301 GGCGGAGCGATCGCTTTGGTCTCCTTTTTGCTCTTAACGCCATTTATCGT 350
||||||||||||||||||||.|||||||||||||||||||||||||||.|
BSU05830___gm 301 GGCGGAGCGATCGCTTTGGTTTCCTTTTTGCTCTTAACGCCATTTATCAT 350
BSNT_01003 351 TCAGCCGGAAACAGGAGATGCCGTTACAGGGGTTATTCCGGTCGACCGTC 400
|||||||||||||||.||||||.|||||||||||||.||||||||.||||
BSU05830___gm 351 TCAGCCGGAAACAGGTGATGCCATTACAGGGGTTATCCCGGTCGATCGTC 400
BSNT_01003 401 TCGGTGCAAAAGGGATGTTTCTTGGGATGATTACGGCATTTCTTTCTGGT 450
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU05830___gm 401 TCGGTGCAAAAGGGATGTTTCTTGGGATGATTACGGCATTTCTTTCTGGC 450
BSNT_01003 451 GAAATTTACAGAAGAATCGTTCAAAAAAACCTGACAATCAAAATGCCAGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05830___gm 451 GAAATTTACAGAAGAATCGTTCAAAAAAACCTGACAATCAAAATGCCAGC 500
BSNT_01003 501 CGGCGTTCCGCCTGCTGTAGCAAAATCATTCGCCGCACTTATTCCGGCTT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05830___gm 501 CGGCGTTCCGCCTGCTGTAGCAAAATCATTCGCCGCACTTATTCCGGCTT 550
BSNT_01003 551 TTATCACATTGACCGTATTTTTGCTGATTAACGTAATGGTGACTCTGTTT 600
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU05830___gm 551 TTATCACATTGACTGTATTTTTGCTGATTAACGTAATGGTGACTCTGTTT 600
BSNT_01003 601 TTTAAAACAAATATGCACGACGTTATTTATCACGCGATTCAGGCTCCGCT 650
|||||||||||||||||||||||.||||||||.|||||||||||||||||
BSU05830___gm 601 TTTAAAACAAATATGCACGACGTCATTTATCATGCGATTCAGGCTCCGCT 650
BSNT_01003 651 TGTCGGACTTGGAAGCGGTATCATTCCAACGCTGATTGCCGTGTTTTTCA 700
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU05830___gm 651 TGTCGGACTTGGAAGCGGTATCATTCCAACACTGATTGCCGTGTTTTTCA 700
BSNT_01003 701 TACAAATTCTTTGGTTTTTCGGACTGCATGGACAGATCATTATCAACTCC 750
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU05830___gm 701 TTCAAATTCTTTGGTTTTTCGGACTGCATGGACAGATCATTATCAACTCC 750
BSNT_01003 751 GTGATGGACCCGATTTGGAATACACTGCA-GTAG---------------- 783
||||||||||||||||||||||||||||| ||||
BSU05830___gm 751 GTGATGGACCCGATTTGGAATACACTGCAGGTAGAAAACCTTTCTGCTTA 800
BSNT_01003 783 -------------------------------------------------- 783
BSU05830___gm 801 CACGGCGGGAAAAGAAATCCCTCATATTATTTCAAAACCGTTTATGGAGA 850
BSNT_01003 783 -------------------------------------------------- 783
BSU05830___gm 851 TTTATACAGTAGGGATGGGCGGAACAGGGATGACGCTTGCGATTGTGTTT 900
BSNT_01003 783 -------------------------------------------------- 783
BSU05830___gm 901 ACCATTCTCATATTCATGAAAAGCAGGCAGATGAAGCAAGTATCAAAACT 950
BSNT_01003 783 -------------------------------------------------- 783
BSU05830___gm 951 TGGCCTCGCTCCCGGTATTTTTAACGTAAACGAACCGATTATCTTTGGGC 1000
BSNT_01003 783 -------------------------------------------------- 783
BSU05830___gm 1001 TTCCGATTGTCATGAATCCGATCATTATTGTGCCTTGGGTGCTGGCACCG 1050
BSNT_01003 783 -------------------------------------------------- 783
BSU05830___gm 1051 ATGGTTGTTACGCTCGTCACCTATCTGGCTATGTCAGCCGGGCTCGTTCC 1100
BSNT_01003 783 -------------------------------------------------- 783
BSU05830___gm 1101 GCCTCCAACTGGTGTGACAGTGCCGTGGACGGTTCCATTATTCATTAATG 1150
BSNT_01003 783 -------------------------------------------------- 783
BSU05830___gm 1151 GCATCATGGCGACGAACTCAATCATGGGGGGCGTGATGCAGCTTATCAAT 1200
BSNT_01003 783 -------------------------------------------------- 783
BSU05830___gm 1201 CTGCTGATTGTCTTCGTGATCTGGTTTCCGTTCCTAAAAGCAATGGATAA 1250
BSNT_01003 783 -------------------------------------------------- 783
BSU05830___gm 1251 ATTAAATCTGGCAAAAGAAAAAGAACAGGCTGTGCAGGAGACAGCTGCTC 1300
BSNT_01003 783 ----------------------------- 783
BSU05830___gm 1301 AGCAAAATGATAACAGCATAAAAATGTGA 1329
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