Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01001 and BSU05810

See Amino acid alignment / Visit BSNT_01001 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:30
# Commandline: needle
#    -asequence dna-align/BSNT_01001.1.22522.seq
#    -bsequence dna-align/BSU05810___gmuB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01001-BSU05810___gmuB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01001-BSU05810___gmuB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01001
# 2: BSU05810___gmuB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity:     274/312 (87.8%)
# Similarity:   274/312 (87.8%)
# Gaps:          33/312 (10.6%)
# Score: 1350.0
# 
#
#=======================================

BSNT_01001         1 ---------------------------------ATGTCTACCAGTTTATT     17
                                                      |||||||||||||||||
BSU05810___gm      1 TTGAAAAAAATATTACTCGCGTGCAGTTCAGGAATGTCTACCAGTTTATT     50

BSNT_01001        18 GGTGACAAAAATGAAGGAATACGCACAGTCTATCGGTGAGGAAGCAGAGA     67
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU05810___gm     51 GGTGACAAAAATGAAGGAATACGCACAGTCTATCGGTGAGGAAGCGGAGA    100

BSNT_01001        68 TTTGGGCTGTTGGCCAGGATAAAGCAAAAGAAGACATGAGAAAAGCGGAT    117
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05810___gm    101 TTTGGGCTGTTGGCCAGGATAAAGCAAAAGAAGACATGAGAAAAGCGGAT    150

BSNT_01001       118 GCCGTTTTGATCGGTCCGCAAATGAGCTTTCTGAAAAGCGAACTCCAAAA    167
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU05810___gm    151 GCCGTTTTGATCGGTCCGCAAATGAGCTTTCTGAAAAGCGAGCTCCAAAA    200

BSNT_01001       168 AGAAGCGGATCAATACAACATTCGGGTTGAAGTCATTGACATGATGGCCT    217
                     ||||||.||||||||||||||||..|||||||||||||||||||||||||
BSU05810___gm    201 AGAAGCAGATCAATACAACATTCAAGTTGAAGTCATTGACATGATGGCCT    250

BSNT_01001       218 ACGGAATGGCAGATGGGAAAAAAGCGTATGAGCAGGCATTGTCCTTAATG    267
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05810___gm    251 ACGGAATGGCAGATGGGAAAAAAGCGTATGAGCAGGCATTGTCCTTAATG    300

BSNT_01001       268 GTGAATCAATAA    279
                     ||||||||||||
BSU05810___gm    301 GTGAATCAATAA    312


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