Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00995 and BSU05780

See Amino acid alignment / Visit BSNT_00995 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:30
# Commandline: needle
#    -asequence dna-align/BSNT_00995___ydhJ.1.22522.seq
#    -bsequence dna-align/BSU05780___ydhJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00995___ydhJ-BSU05780___ydhJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00995___ydhJ-BSU05780___ydhJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00995___ydhJ
# 2: BSU05780___ydhJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 978
# Identity:     956/978 (97.8%)
# Similarity:   956/978 (97.8%)
# Gaps:           0/978 ( 0.0%)
# Score: 4692.0
# 
#
#=======================================

BSNT_00995___      1 ATGGAAATCAGCGATGTTATTTACGGGCACCACCATATAGACGGAGTGCT     50
                     |||||||||||||||.|.|||||||||||.||||||||||||||||||||
BSU05780___yd      1 ATGGAAATCAGCGATATCATTTACGGGCAGCACCATATAGACGGAGTGCT     50

BSNT_00995___     51 GGAAGAGCTTATCAAAAGCGCTCCTGTGCAAAGATTAAAAGGAATCTATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd     51 GGAAGAGCTTATCAAAAGCGCTCCTGTGCAAAGATTAAAAGGAATCTATC    100

BSNT_00995___    101 AAGGCGGAGCAAGCTTTTTAGTCAATCAAAAGTGGAATGTGACCAGATAT    150
                     |||||||||||||||||||||||||||.||||||||||||||||||.|||
BSU05780___yd    101 AAGGCGGAGCAAGCTTTTTAGTCAATCGAAAGTGGAATGTGACCAGGTAT    150

BSNT_00995___    151 GAGCACTGCATCGGCGTAATGCTCCTCATCAAAAAGCTCGGAGGAACGAT    200
                     |||||||.|||||||||.||||||||||||||||||||||||||||||||
BSU05780___yd    151 GAGCACTCCATCGGCGTGATGCTCCTCATCAAAAAGCTCGGAGGAACGAT    200

BSNT_00995___    201 AGAAGAACAGATTGCGGGTCTGCTCCACGACGTATCACACACAGCTTTTT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd    201 AGAAGAACAGATTGCGGGTCTGCTCCACGACGTATCACACACAGCTTTTT    250

BSNT_00995___    251 CTCATGTGGTCGACGTTGTCTTTGAAAATCAAGCAGAAGACTATCATGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd    251 CTCATGTGGTCGACGTTGTCTTTGAAAATCAAGCAGAAGACTATCATGAA    300

BSNT_00995___    301 AACATCTTTCAACAAGTCATTGTTCACTCTGAAATCCCGGACATTTTACA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd    301 AACATCTTTCAACAAGTCATTGTTCACTCTGAAATCCCGGACATTTTACA    350

BSNT_00995___    351 AAAACACGGCTATCATACTGAAGAACTTTTATCTGACGATTCAAGGTGGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd    351 AAAACACGGCTATCATACTGAAGAACTTTTATCTGACGATTCAAGGTGGA    400

BSNT_00995___    401 CATTGCTCGAACAGCCCGCACCGGAGCTGTGTGCTGATCGGACAGACTAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd    401 CATTGCTCGAACAGCCCGCACCGGAGCTGTGTGCTGATCGGACAGACTAT    450

BSNT_00995___    451 ACGCTGCGTGATATATACCGATATGGACACATTAACCTGCACGAAGCGCA    500
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU05780___yd    451 ACGCTGCGTGATATGTACCGATATGGACACATTAACCTGCACGAAGCGCA    500

BSNT_00995___    501 AACCTTTTTGGATCATCTTATTGTGAGAAACGGAAGGATGTTTCCAGATA    550
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU05780___yd    501 AACCTTTTTGGATCATCTTATTGTGAGAAACGGAAGGATGTTTCCTGATA    550

BSNT_00995___    551 GTATTGAAGCTGGCGAATGGTTTGTCAGTGTGTACTACAAGGAAGTAATT    600
                     ||||||||||.|.|||||||||||||||||||||||||||||||||||||
BSU05780___yd    551 GTATTGAAGCCGCCGAATGGTTTGTCAGTGTGTACTACAAGGAAGTAATT    600

BSNT_00995___    601 GATTTCTTTTTGAATCCTGTGAATGTATATGGATATGAATATTTAGCGCG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd    601 GATTTCTTTTTGAATCCTGTGAATGTATATGGATATGAATATTTAGCGCG    650

BSNT_00995___    651 AGCATTGAAGGCAGCGCTGCGGCATGATGTCATATCCGCAGAGGATCTGC    700
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU05780___yd    651 AGCATTGAAGGCAGCGCTGCGGCATGATGTCATATCTGCAGAGGATCTGC    700

BSNT_00995___    701 TGAAAACGGACCAAGAGGTACTGAACATCCTGCGTGCATCAAAAAATGAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd    701 TGAAAACGGACCAAGAGGTACTGAACATCCTGCGTGCATCAAAAAATGAA    750

BSNT_00995___    751 GAAGTTCTGAGCTTGCTTACATCCATTCATCCCGGCATACAAGTAATAGA    800
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd    751 GAAGTCCTGAGCTTGCTTACATCCATTCATCCCGGCATACAAGTAATAGA    800

BSNT_00995___    801 AGATGACATCCAGTACGATTTCCATCAAAAGAAGAAAATGCGACTAATCG    850
                     .|||||||||||||||||||||||||||||||||||||||||.|||||||
BSU05780___yd    801 GGATGACATCCAGTACGATTTCCATCAAAAGAAGAAAATGCGCCTAATCG    850

BSNT_00995___    851 ATCCATCCATTTTTTTTGATGGTGAATGGATCAAATCCTCAGATGCTTCT    900
                     ||||||||||||||.||||||...||||||||||||||||||.||.||||
BSU05780___yd    851 ATCCATCCATTTTTCTTGATGACAAATGGATCAAATCCTCAGGTGTTTCT    900

BSNT_00995___    901 GAAAAGGTGAGGAAAATGGGTGAGGCCGCTTATCAAAAAGCAAAAAAAGG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd    901 GAAAAGGTGAGGAAAATGGGTGAGGCCGCTTATCAAAAAGCAAAAAAAGG    950

BSNT_00995___    951 TGTGTATATAAAAATCTTAAATCAGTAA    978
                     |||||||||||||||||||||.||||||
BSU05780___yd    951 TGTGTATATAAAAATCTTAAAGCAGTAA    978


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