Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00995 and BSU05780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:30
# Commandline: needle
# -asequence dna-align/BSNT_00995___ydhJ.1.22522.seq
# -bsequence dna-align/BSU05780___ydhJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00995___ydhJ-BSU05780___ydhJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00995___ydhJ-BSU05780___ydhJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00995___ydhJ
# 2: BSU05780___ydhJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 978
# Identity: 956/978 (97.8%)
# Similarity: 956/978 (97.8%)
# Gaps: 0/978 ( 0.0%)
# Score: 4692.0
#
#
#=======================================
BSNT_00995___ 1 ATGGAAATCAGCGATGTTATTTACGGGCACCACCATATAGACGGAGTGCT 50
|||||||||||||||.|.|||||||||||.||||||||||||||||||||
BSU05780___yd 1 ATGGAAATCAGCGATATCATTTACGGGCAGCACCATATAGACGGAGTGCT 50
BSNT_00995___ 51 GGAAGAGCTTATCAAAAGCGCTCCTGTGCAAAGATTAAAAGGAATCTATC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd 51 GGAAGAGCTTATCAAAAGCGCTCCTGTGCAAAGATTAAAAGGAATCTATC 100
BSNT_00995___ 101 AAGGCGGAGCAAGCTTTTTAGTCAATCAAAAGTGGAATGTGACCAGATAT 150
|||||||||||||||||||||||||||.||||||||||||||||||.|||
BSU05780___yd 101 AAGGCGGAGCAAGCTTTTTAGTCAATCGAAAGTGGAATGTGACCAGGTAT 150
BSNT_00995___ 151 GAGCACTGCATCGGCGTAATGCTCCTCATCAAAAAGCTCGGAGGAACGAT 200
|||||||.|||||||||.||||||||||||||||||||||||||||||||
BSU05780___yd 151 GAGCACTCCATCGGCGTGATGCTCCTCATCAAAAAGCTCGGAGGAACGAT 200
BSNT_00995___ 201 AGAAGAACAGATTGCGGGTCTGCTCCACGACGTATCACACACAGCTTTTT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd 201 AGAAGAACAGATTGCGGGTCTGCTCCACGACGTATCACACACAGCTTTTT 250
BSNT_00995___ 251 CTCATGTGGTCGACGTTGTCTTTGAAAATCAAGCAGAAGACTATCATGAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd 251 CTCATGTGGTCGACGTTGTCTTTGAAAATCAAGCAGAAGACTATCATGAA 300
BSNT_00995___ 301 AACATCTTTCAACAAGTCATTGTTCACTCTGAAATCCCGGACATTTTACA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd 301 AACATCTTTCAACAAGTCATTGTTCACTCTGAAATCCCGGACATTTTACA 350
BSNT_00995___ 351 AAAACACGGCTATCATACTGAAGAACTTTTATCTGACGATTCAAGGTGGA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd 351 AAAACACGGCTATCATACTGAAGAACTTTTATCTGACGATTCAAGGTGGA 400
BSNT_00995___ 401 CATTGCTCGAACAGCCCGCACCGGAGCTGTGTGCTGATCGGACAGACTAT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd 401 CATTGCTCGAACAGCCCGCACCGGAGCTGTGTGCTGATCGGACAGACTAT 450
BSNT_00995___ 451 ACGCTGCGTGATATATACCGATATGGACACATTAACCTGCACGAAGCGCA 500
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU05780___yd 451 ACGCTGCGTGATATGTACCGATATGGACACATTAACCTGCACGAAGCGCA 500
BSNT_00995___ 501 AACCTTTTTGGATCATCTTATTGTGAGAAACGGAAGGATGTTTCCAGATA 550
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU05780___yd 501 AACCTTTTTGGATCATCTTATTGTGAGAAACGGAAGGATGTTTCCTGATA 550
BSNT_00995___ 551 GTATTGAAGCTGGCGAATGGTTTGTCAGTGTGTACTACAAGGAAGTAATT 600
||||||||||.|.|||||||||||||||||||||||||||||||||||||
BSU05780___yd 551 GTATTGAAGCCGCCGAATGGTTTGTCAGTGTGTACTACAAGGAAGTAATT 600
BSNT_00995___ 601 GATTTCTTTTTGAATCCTGTGAATGTATATGGATATGAATATTTAGCGCG 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd 601 GATTTCTTTTTGAATCCTGTGAATGTATATGGATATGAATATTTAGCGCG 650
BSNT_00995___ 651 AGCATTGAAGGCAGCGCTGCGGCATGATGTCATATCCGCAGAGGATCTGC 700
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU05780___yd 651 AGCATTGAAGGCAGCGCTGCGGCATGATGTCATATCTGCAGAGGATCTGC 700
BSNT_00995___ 701 TGAAAACGGACCAAGAGGTACTGAACATCCTGCGTGCATCAAAAAATGAA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd 701 TGAAAACGGACCAAGAGGTACTGAACATCCTGCGTGCATCAAAAAATGAA 750
BSNT_00995___ 751 GAAGTTCTGAGCTTGCTTACATCCATTCATCCCGGCATACAAGTAATAGA 800
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd 751 GAAGTCCTGAGCTTGCTTACATCCATTCATCCCGGCATACAAGTAATAGA 800
BSNT_00995___ 801 AGATGACATCCAGTACGATTTCCATCAAAAGAAGAAAATGCGACTAATCG 850
.|||||||||||||||||||||||||||||||||||||||||.|||||||
BSU05780___yd 801 GGATGACATCCAGTACGATTTCCATCAAAAGAAGAAAATGCGCCTAATCG 850
BSNT_00995___ 851 ATCCATCCATTTTTTTTGATGGTGAATGGATCAAATCCTCAGATGCTTCT 900
||||||||||||||.||||||...||||||||||||||||||.||.||||
BSU05780___yd 851 ATCCATCCATTTTTCTTGATGACAAATGGATCAAATCCTCAGGTGTTTCT 900
BSNT_00995___ 901 GAAAAGGTGAGGAAAATGGGTGAGGCCGCTTATCAAAAAGCAAAAAAAGG 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05780___yd 901 GAAAAGGTGAGGAAAATGGGTGAGGCCGCTTATCAAAAAGCAAAAAAAGG 950
BSNT_00995___ 951 TGTGTATATAAAAATCTTAAATCAGTAA 978
|||||||||||||||||||||.||||||
BSU05780___yd 951 TGTGTATATAAAAATCTTAAAGCAGTAA 978
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