Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00986 and BSU05720

See Amino acid alignment / Visit BSNT_00986 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:29
# Commandline: needle
#    -asequence dna-align/BSNT_00986___ydhE.1.22522.seq
#    -bsequence dna-align/BSU05720___ydhE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00986___ydhE-BSU05720___ydhE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00986___ydhE-BSU05720___ydhE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00986___ydhE
# 2: BSU05720___ydhE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1188
# Identity:    1175/1188 (98.9%)
# Similarity:  1175/1188 (98.9%)
# Gaps:           0/1188 ( 0.0%)
# Score: 5823.0
# 
#
#=======================================

BSNT_00986___      1 ATGAAGACAGTATTGATTTTGAATTTTCCTGCGGAAGGCCATGTGAATCC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd      1 ATGAAGACAGTATTGATTTTGAATTTTCCTGCGGAAGGCCATGTGAATCC     50

BSNT_00986___     51 TACCTTAGGCATTACAAAAGCGTTTTCCGATAAGGGATATGATGTCCATT    100
                     |||.|||||||||||.||||||||||||||||||||||||||||||||||
BSU05720___yd     51 TACTTTAGGCATTACGAAAGCGTTTTCCGATAAGGGATATGATGTCCATT    100

BSNT_00986___    101 ATATATCCACTGAAAAATATAAAAAACGATTAGAAGCAGCGGGAGCAACG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd    101 ATATATCCACTGAAAAATATAAAAAACGATTAGAAGCAGCGGGAGCAACG    150

BSNT_00986___    151 GTCCATCTTCACCGGGATCTGCTGCGAACGACACCTATTCATGTCGGTTC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd    151 GTCCATCTTCACCGGGATCTGCTGCGAACGACACCTATTCATGTCGGTTC    200

BSNT_00986___    201 GCCCAATGGCATTCTTGATTTCGTGAAAATCCATATCAAAACGTCATTGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd    201 GCCCAATGGCATTCTTGATTTCGTGAAAATCCATATCAAAACGTCATTGG    250

BSNT_00986___    251 ACATTTTACAGATTGTCAAAGACTTATCTAAGAGCATTCAATTTGATTTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd    251 ACATTTTACAGATTGTCAAAGACTTATCTAAGAGCATTCAATTTGATTTT    300

BSNT_00986___    301 GTTTATTATGATAAATTCGGCGCGGGGGAATTGGTAAGGGATTACTTAGA    350
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU05720___yd    301 GTTTATTATGATAAATTCGGCGCGGGGGAATTGGTGAGGGATTACTTAGA    350

BSNT_00986___    351 TATTCCAGGAGTCTCTTCATCGGCGTCTTTCTTGTTTGGCGAGGAGCACC    400
                     |||||||||.|||||||||||||||||||||.||||||||||||||||.|
BSU05720___yd    351 TATTCCAGGGGTCTCTTCATCGGCGTCTTTCCTGTTTGGCGAGGAGCATC    400

BSNT_00986___    401 TGAAAATCCTGCCGCTGCATCCGGAGTCTGGAGCGCCGCTTGAATTGGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd    401 TGAAAATCCTGCCGCTGCATCCGGAGTCTGGAGCGCCGCTTGAATTGGAT    450

BSNT_00986___    451 CAAGAGTGCGAAGATCTTTTGGCAAAAATGAAAGAAACGTACGGTGTTGC    500
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU05720___yd    451 CAAGAGTGCGAAGACCTTTTGGCAAAAATGAAAGAAACGTACGGTGTTGC    500

BSNT_00986___    501 CCCGAAAAACCTGGTTCAATTCATGAACAATAAAGGGGAATTGAACGTAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd    501 CCCGAAAAACCTGGTTCAATTCATGAACAATAAAGGGGAATTGAACGTAG    550

BSNT_00986___    551 TGTATACAAGCCGTTATTTTCAGCCAGAAAGTGATCGTTTCGGGGATGAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd    551 TGTATACAAGCCGTTATTTTCAGCCAGAAAGTGATCGTTTCGGGGATGAA    600

BSNT_00986___    601 TGTCTGTTTATCGGGCCAAGCTTTCCAAAGAGAGCGGAAAAAACGGATTT    650
                     |||||.|||||||||||.||||||||||||||||||||||||||.|||||
BSU05720___yd    601 TGTCTATTTATCGGGCCGAGCTTTCCAAAGAGAGCGGAAAAAACAGATTT    650

BSNT_00986___    651 CCCGATTGAACAGCTAAAAGATGAGAGTGTCATTTATATTTCAATGGGGA    700
                     ||||||||||||||||||||||||||..||||||||||||||||||||||
BSU05720___yd    651 CCCGATTGAACAGCTAAAAGATGAGAAGGTCATTTATATTTCAATGGGGA    700

BSNT_00986___    701 CTGTACTGGATCATACAGAGGATTTCTTCAACCTTTGTATTGATGCATTT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd    701 CTGTACTGGATCATACAGAGGATTTCTTCAACCTTTGTATTGATGCATTT    750

BSNT_00986___    751 TCAGGCTTTAACGGAAAAGTCGTCATCGCTGCCGGAGAAAAAGCGGACCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd    751 TCAGGCTTTAACGGAAAAGTCGTCATCGCTGCCGGAGAAAAAGCGGACCT    800

BSNT_00986___    801 GACCAAATTAAAGCAGGCGCCGGAAAACTTTATCATTGCTCCGTATGTCC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd    801 GACCAAATTAAAGCAGGCGCCGGAAAACTTTATCATTGCTCCGTATGTCC    850

BSNT_00986___    851 CTCAGCTGGAAGTGCTGGAGCAATCGGATGTTTTCATTACACACGGCGGA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd    851 CTCAGCTGGAAGTGCTGGAGCAATCGGATGTTTTCATTACACACGGCGGA    900

BSNT_00986___    901 ATGAACAGCGTAAACGAAGGCATTCATTTCAGCGTGCCACTGGTTGTCAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd    901 ATGAACAGCGTAAACGAAGGCATTCATTTCAGCGTGCCACTGGTTGTCAT    950

BSNT_00986___    951 GCCTCATGACAAGGATCAGCCGATGGTGGCGCAGCGTCTCTCTGAACTCC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd    951 GCCTCATGACAAGGATCAGCCGATGGTGGCGCAGCGTCTCTCTGAACTCC   1000

BSNT_00986___   1001 ATGCAGGCTATGTCATCTCTAAAGATGAAGTCAATGCCCAAATATTAAAA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd   1001 ATGCAGGCTATGTCATCTCTAAAGATGAAGTCAATGCCCAAATATTAAAA   1050

BSNT_00986___   1051 CAGGCCGTAGATGAGGTTTTGCGCAACGATCAGTATATGGCAGGCATTAA   1100
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU05720___yd   1051 CAGGCCGTAGATGAGGTTTTGCGCAACGATCAGTATACGGCAGGCATTAA   1100

BSNT_00986___   1101 AAAAATCAATCAAAGCTTCAAAGAATGTATGGACATGGAAGAAGTGATGG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd   1101 AAAAATCAATCAAAGCTTCAAAGAATGTATGGACATGGAAGAAGTGATGG   1150

BSNT_00986___   1151 AGCGGATTGATGAGTTGATTCGCCAAAAAAACAAATAA   1188
                     ||||||||||||||||||||||||||||||||||||||
BSU05720___yd   1151 AGCGGATTGATGAGTTGATTCGCCAAAAAAACAAATAA   1188


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