Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00986 and BSU05720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:29
# Commandline: needle
# -asequence dna-align/BSNT_00986___ydhE.1.22522.seq
# -bsequence dna-align/BSU05720___ydhE.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00986___ydhE-BSU05720___ydhE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00986___ydhE-BSU05720___ydhE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00986___ydhE
# 2: BSU05720___ydhE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1188
# Identity: 1175/1188 (98.9%)
# Similarity: 1175/1188 (98.9%)
# Gaps: 0/1188 ( 0.0%)
# Score: 5823.0
#
#
#=======================================
BSNT_00986___ 1 ATGAAGACAGTATTGATTTTGAATTTTCCTGCGGAAGGCCATGTGAATCC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 1 ATGAAGACAGTATTGATTTTGAATTTTCCTGCGGAAGGCCATGTGAATCC 50
BSNT_00986___ 51 TACCTTAGGCATTACAAAAGCGTTTTCCGATAAGGGATATGATGTCCATT 100
|||.|||||||||||.||||||||||||||||||||||||||||||||||
BSU05720___yd 51 TACTTTAGGCATTACGAAAGCGTTTTCCGATAAGGGATATGATGTCCATT 100
BSNT_00986___ 101 ATATATCCACTGAAAAATATAAAAAACGATTAGAAGCAGCGGGAGCAACG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 101 ATATATCCACTGAAAAATATAAAAAACGATTAGAAGCAGCGGGAGCAACG 150
BSNT_00986___ 151 GTCCATCTTCACCGGGATCTGCTGCGAACGACACCTATTCATGTCGGTTC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 151 GTCCATCTTCACCGGGATCTGCTGCGAACGACACCTATTCATGTCGGTTC 200
BSNT_00986___ 201 GCCCAATGGCATTCTTGATTTCGTGAAAATCCATATCAAAACGTCATTGG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 201 GCCCAATGGCATTCTTGATTTCGTGAAAATCCATATCAAAACGTCATTGG 250
BSNT_00986___ 251 ACATTTTACAGATTGTCAAAGACTTATCTAAGAGCATTCAATTTGATTTT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 251 ACATTTTACAGATTGTCAAAGACTTATCTAAGAGCATTCAATTTGATTTT 300
BSNT_00986___ 301 GTTTATTATGATAAATTCGGCGCGGGGGAATTGGTAAGGGATTACTTAGA 350
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU05720___yd 301 GTTTATTATGATAAATTCGGCGCGGGGGAATTGGTGAGGGATTACTTAGA 350
BSNT_00986___ 351 TATTCCAGGAGTCTCTTCATCGGCGTCTTTCTTGTTTGGCGAGGAGCACC 400
|||||||||.|||||||||||||||||||||.||||||||||||||||.|
BSU05720___yd 351 TATTCCAGGGGTCTCTTCATCGGCGTCTTTCCTGTTTGGCGAGGAGCATC 400
BSNT_00986___ 401 TGAAAATCCTGCCGCTGCATCCGGAGTCTGGAGCGCCGCTTGAATTGGAT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 401 TGAAAATCCTGCCGCTGCATCCGGAGTCTGGAGCGCCGCTTGAATTGGAT 450
BSNT_00986___ 451 CAAGAGTGCGAAGATCTTTTGGCAAAAATGAAAGAAACGTACGGTGTTGC 500
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU05720___yd 451 CAAGAGTGCGAAGACCTTTTGGCAAAAATGAAAGAAACGTACGGTGTTGC 500
BSNT_00986___ 501 CCCGAAAAACCTGGTTCAATTCATGAACAATAAAGGGGAATTGAACGTAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 501 CCCGAAAAACCTGGTTCAATTCATGAACAATAAAGGGGAATTGAACGTAG 550
BSNT_00986___ 551 TGTATACAAGCCGTTATTTTCAGCCAGAAAGTGATCGTTTCGGGGATGAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 551 TGTATACAAGCCGTTATTTTCAGCCAGAAAGTGATCGTTTCGGGGATGAA 600
BSNT_00986___ 601 TGTCTGTTTATCGGGCCAAGCTTTCCAAAGAGAGCGGAAAAAACGGATTT 650
|||||.|||||||||||.||||||||||||||||||||||||||.|||||
BSU05720___yd 601 TGTCTATTTATCGGGCCGAGCTTTCCAAAGAGAGCGGAAAAAACAGATTT 650
BSNT_00986___ 651 CCCGATTGAACAGCTAAAAGATGAGAGTGTCATTTATATTTCAATGGGGA 700
||||||||||||||||||||||||||..||||||||||||||||||||||
BSU05720___yd 651 CCCGATTGAACAGCTAAAAGATGAGAAGGTCATTTATATTTCAATGGGGA 700
BSNT_00986___ 701 CTGTACTGGATCATACAGAGGATTTCTTCAACCTTTGTATTGATGCATTT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 701 CTGTACTGGATCATACAGAGGATTTCTTCAACCTTTGTATTGATGCATTT 750
BSNT_00986___ 751 TCAGGCTTTAACGGAAAAGTCGTCATCGCTGCCGGAGAAAAAGCGGACCT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 751 TCAGGCTTTAACGGAAAAGTCGTCATCGCTGCCGGAGAAAAAGCGGACCT 800
BSNT_00986___ 801 GACCAAATTAAAGCAGGCGCCGGAAAACTTTATCATTGCTCCGTATGTCC 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 801 GACCAAATTAAAGCAGGCGCCGGAAAACTTTATCATTGCTCCGTATGTCC 850
BSNT_00986___ 851 CTCAGCTGGAAGTGCTGGAGCAATCGGATGTTTTCATTACACACGGCGGA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 851 CTCAGCTGGAAGTGCTGGAGCAATCGGATGTTTTCATTACACACGGCGGA 900
BSNT_00986___ 901 ATGAACAGCGTAAACGAAGGCATTCATTTCAGCGTGCCACTGGTTGTCAT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 901 ATGAACAGCGTAAACGAAGGCATTCATTTCAGCGTGCCACTGGTTGTCAT 950
BSNT_00986___ 951 GCCTCATGACAAGGATCAGCCGATGGTGGCGCAGCGTCTCTCTGAACTCC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 951 GCCTCATGACAAGGATCAGCCGATGGTGGCGCAGCGTCTCTCTGAACTCC 1000
BSNT_00986___ 1001 ATGCAGGCTATGTCATCTCTAAAGATGAAGTCAATGCCCAAATATTAAAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 1001 ATGCAGGCTATGTCATCTCTAAAGATGAAGTCAATGCCCAAATATTAAAA 1050
BSNT_00986___ 1051 CAGGCCGTAGATGAGGTTTTGCGCAACGATCAGTATATGGCAGGCATTAA 1100
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU05720___yd 1051 CAGGCCGTAGATGAGGTTTTGCGCAACGATCAGTATACGGCAGGCATTAA 1100
BSNT_00986___ 1101 AAAAATCAATCAAAGCTTCAAAGAATGTATGGACATGGAAGAAGTGATGG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05720___yd 1101 AAAAATCAATCAAAGCTTCAAAGAATGTATGGACATGGAAGAAGTGATGG 1150
BSNT_00986___ 1151 AGCGGATTGATGAGTTGATTCGCCAAAAAAACAAATAA 1188
||||||||||||||||||||||||||||||||||||||
BSU05720___yd 1151 AGCGGATTGATGAGTTGATTCGCCAAAAAAACAAATAA 1188
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