Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00983 and BSU05700

See Amino acid alignment / Visit BSNT_00983 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:28
# Commandline: needle
#    -asequence dna-align/BSNT_00983___ydhC.1.22522.seq
#    -bsequence dna-align/BSU05700___ydhC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00983___ydhC-BSU05700___ydhC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00983___ydhC-BSU05700___ydhC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00983___ydhC
# 2: BSU05700___ydhC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 675
# Identity:     670/675 (99.3%)
# Similarity:   670/675 (99.3%)
# Gaps:           0/675 ( 0.0%)
# Score: 3330.0
# 
#
#=======================================

BSNT_00983___      1 ATGGACGATTTTAAATTAGATAAGCCGACTCCCTACTACCTGCAATTTTA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05700___yd      1 ATGGACGATTTTAAATTAGATAAGCCGACTCCCTACTACCTGCAATTTTA     50

BSNT_00983___     51 TAACCAGCTAAAAAAAATGATCTTCAACGGGACTTTTAAGCCTGGGGAAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05700___yd     51 TAACCAGCTAAAAAAAATGATCTTCAACGGGACTTTTAAGCCTGGGGAAC    100

BSNT_00983___    101 GGATAAATGAAACACAGCTGGCGAAAAGCTTTGGCGTCAGCCGCTCTCCG    150
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU05700___yd    101 GGATAAACGAAACACAGCTGGCGAAAAGCTTTGGCGTCAGCCGCTCTCCG    150

BSNT_00983___    151 ATAAGGGAAGCCATGCGATTGCTTGAGAAAGATGGTTTGTTAAAAGCGGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05700___yd    151 ATAAGGGAAGCCATGCGATTGCTTGAGAAAGATGGTTTGTTAAAAGCGGA    200

BSNT_00983___    201 TGACCGAAATGGGTTTTCGATCACGTCGTTAACGGCAAAAGATGTAGATG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05700___yd    201 TGACCGAAATGGGTTTTCGATCACGTCGTTAACGGCAAAAGATGTAGATG    250

BSNT_00983___    251 AGATTTATAAAATCAGAATTCCGCTGGAGCAGCTGGCAGTCGAATTAGTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05700___yd    251 AGATTTATAAAATCAGAATTCCGCTGGAGCAGCTGGCAGTCGAATTAGTC    300

BSNT_00983___    301 ATAGACGAAGCGGACGAAGAAGAGCTGACCATACTCGAAAAACAGCTTGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05700___yd    301 ATAGACGAAGCGGACGAAGAAGAGCTGACCATACTCGAAAAACAGCTTGA    350

BSNT_00983___    351 AGAAACAGAGAAAGCCATTCGCAACGGCACGGAAGATACGGAAATCATTC    400
                     |||||||||||||||.||||.||||||||||||||||||.||||||||||
BSU05700___yd    351 AGAAACAGAGAAAGCGATTCACAACGGCACGGAAGATACAGAAATCATTC    400

BSNT_00983___    401 GTTTAAACCAAAAATTTCATGAGCTGCTGGTTGATTTCAGCCATAACAGA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05700___yd    401 GTTTAAACCAAAAATTTCATGAGCTGCTGGTTGATTTCAGCCATAACAGA    450

BSNT_00983___    451 CATTTGAAAAATTTGCTTGAGCATGTAAATGACCTGATTCATTTTTGCAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05700___yd    451 CATTTGAAAAATTTGCTTGAGCATGTAAATGACCTGATTCATTTTTGCAG    500

BSNT_00983___    501 AATTCTTAATTATACCGGCGACCACCGCGCAGAAACGATACTGCGTGAGC    550
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU05700___yd    501 AATCCTTAATTATACCGGCGACCACCGCGCAGAAACGATACTGCGTGAGC    550

BSNT_00983___    551 ACCGCAGGATATTTGAAGAAGTGAAAAAGAAAAACAAAGAAGCAGCCAAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05700___yd    551 ACCGCAGGATATTTGAAGAAGTGAAAAAGAAAAACAAAGAAGCAGCCAAA    600

BSNT_00983___    601 CAACATGTGCTGGCTCATTTCAATCATGACTGTGAGCATTTGAAGCATGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05700___yd    601 CAACATGTGCTGGCTCATTTCAATCATGACTGTGAGCATTTGAAGCATGT    650

BSNT_00983___    651 GCTTGAAGAAGGTAAAGAGAATTGA    675
                     |||||||||||||||||||||||||
BSU05700___yd    651 GCTTGAAGAAGGTAAAGAGAATTGA    675


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