Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00975 and BSU05650
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:28
# Commandline: needle
# -asequence dna-align/BSNT_00975___ydgH.1.22522.seq
# -bsequence dna-align/BSU05650___ydgH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00975___ydgH-BSU05650___ydgH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00975___ydgH-BSU05650___ydgH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00975___ydgH
# 2: BSU05650___ydgH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2658
# Identity: 2625/2658 (98.8%)
# Similarity: 2625/2658 (98.8%)
# Gaps: 0/2658 ( 0.0%)
# Score: 12993.0
#
#
#=======================================
BSNT_00975___ 1 ATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCCATAGTATTAGC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 1 ATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCCATAGTATTAGC 50
BSNT_00975___ 51 ACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 51 ACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCA 100
BSNT_00975___ 101 ATCAAAAGGGGCAGGCCCAGCTTCCCGCTGATGCTGTTTCAGAAAGGGCA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 101 ATCAAAAGGGGCAGGCCCAGCTTCCCGCTGATGCTGTTTCAGAAAGGGCA 150
BSNT_00975___ 151 AACGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGATCAGTGTTGT 200
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU05650___yd 151 AACGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGATCAGTGTAGT 200
BSNT_00975___ 201 CTTTACATTAGACAACGCTATAAAGAAAGAAACAGAGAATCAGCTCCGGA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 201 CTTTACATTAGACAACGCTATAAAGAAAGAAACAGAGAATCAGCTCCGGA 250
BSNT_00975___ 251 TAATGATTGATAAAATCAAAAAGATCGACGGTGTAGAAGAGGTAACATCT 300
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 251 TAATAATTGATAAAATCAAAAAGATCGACGGTGTAGAAGAGGTAACATCT 300
BSNT_00975___ 301 CCTCTGTCAGCGGAAAAAGAAGTCAAAGACCAGTTGATGTCGAAAGACAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 301 CCTCTGTCAGCGGAAAAAGAAGTCAAAGACCAGTTGATGTCGAAAGACAA 350
BSNT_00975___ 351 GAAAACCGTTCTCATGCCTGTCACGATTACAGGTTCTGATAAAAAGGCGG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 351 GAAAACCGTTCTCATGCCTGTCACGATTACAGGTTCTGATAAAAAGGCGG 400
BSNT_00975___ 401 AAAAAATCGCGGACGAGATTTATCAAATCGTTCCTGATGATTTGACGGCT 450
|||||||.||||||||||||||||||||||||||||||||.||||||||.
BSU05650___yd 401 AAAAAATTGCGGACGAGATTTATCAAATCGTTCCTGATGACTTGACGGCA 450
BSNT_00975___ 451 TATATTACGGGAGCTTCCCTTATCAACCAGGATTTCGCTCACAGCTCAGA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 451 TATATTACGGGAGCTTCCCTTATCAACCAGGATTTCGCTCACAGCTCAGA 500
BSNT_00975___ 501 GGAAGGGCTTAAGAAAACGGAAGTGATCACAGTCTGCCTGATCATCGGTT 550
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU05650___yd 501 GGAAGGGCTTAAGAAAACGGAAGTGATAACAGTCTGCCTGATCATCGGTT 550
BSNT_00975___ 551 TACTGTTGATCGTGTTCCGATCTGTTGTGACGCCTTTTATCCCGATTGTG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 551 TACTGTTGATCGTGTTCCGATCTGTTGTGACGCCTTTTATCCCGATTGTG 600
BSNT_00975___ 601 GTTGTCGGTTTTTCTTATCTGATCAGTCAATCCATACTGGGCATCCTTGT 650
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU05650___yd 601 GTTGTCGGTTTTTCTTATCTGATCAGTCAATCTATACTGGGCATCCTTGT 650
BSNT_00975___ 651 ATACAATGTTGATTTTCCTATCTCGACGTTTACGCAAACCTTCTTAGTTG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 651 ATACAATGTTGATTTTCCTATCTCGACGTTTACGCAAACCTTCTTAGTTG 700
BSNT_00975___ 701 CGATCCTGTTCGGCATTGGAACAGATTACTGCATACTGCTTCTTACACGG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 701 CGATCCTGTTCGGCATTGGAACAGATTACTGCATACTGCTTCTTACACGG 750
BSNT_00975___ 751 TTCCGTGAAGAATTGGCAAACGGGCATGATAAAAAAGAAGCGGCGCTTAT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 751 TTCCGTGAAGAATTGGCAAACGGGCATGATAAAAAAGAAGCGGCGCTTAT 800
BSNT_00975___ 801 CGCTTACCGTACAGGGGGAAAAACCTTATTTATCAGCGGATTTGCGGTAT 850
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 801 CGCTTACCGCACAGGGGGAAAAACCTTATTTATCAGCGGATTTGCGGTAT 850
BSNT_00975___ 851 TGATCGGATTTTCCGCCTTAGGATTTGCGAAGTTTGCGATTTTCCAATCC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 851 TGATCGGATTTTCCGCCTTAGGATTTGCGAAGTTTGCGATTTTCCAATCC 900
BSNT_00975___ 901 GCAGTAGGGGTAGCAGTCGGTGTGGGAATCTTAATGATCATCCTCTACAC 950
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU05650___yd 901 GCAGTAGGGGTAGCAGTCGGTGTGGGAATTTTAATGATCATCCTCTACAC 950
BSNT_00975___ 951 ACTGCTGCCATTATTTATGGTGACGCTGGGTGAAAAATTATTCTGGCCTT 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 951 ACTGCTGCCATTATTTATGGTGACGCTGGGTGAAAAATTATTCTGGCCTT 1000
BSNT_00975___ 1001 CTAAGAAAGTGCTGTCACACAGTGATAACAAACTATGGGCGTTTCTCGGC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 1001 CTAAGAAAGTGCTGTCACACAGTGATAACAAACTATGGGCGTTTCTCGGC 1050
BSNT_00975___ 1051 AGACACTCCGTTGCGCGTCCGTTTCTGTTCATTGTCATAACGGTGGTGAT 1100
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU05650___yd 1051 AGACACTCCGTTGCGCGTCCGTTTCTGTTCATTGTCATCACGGTGGTGAT 1100
BSNT_00975___ 1101 TACGCTTCCGTTCATCTTGACCTATGATGACCAGATTTCATTCGACTCAA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 1101 TACGCTTCCGTTCATCTTGACCTATGATGACCAGATTTCATTCGACTCAA 1150
BSNT_00975___ 1151 CTGCGGAAATCAGCAACGATTATAAATCTATAAAAGCTCTCGAGGCCATT 1200
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU05650___yd 1151 CTGCGGAAATCAGCAGCGATTATAAATCTATAAAAGCTCTCGAGGCCATT 1200
BSNT_00975___ 1201 AAGGATGGATTCGGGGAAGGAAAAGCGTTCCCGATCAATGTTGTCGTAAA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 1201 AAGGATGGATTCGGGGAAGGAAAAGCGTTCCCGATCAATGTTGTCGTAAA 1250
BSNT_00975___ 1251 AGGAGACAAAGATCTTACAACAGCTGATACAATCCCTTATCTAGGAAATA 1300
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU05650___yd 1251 AGGAGACAAAGATCTTACAACAGCTGATACAATCCCCTATCTAGGAAATA 1300
BSNT_00975___ 1301 TCAGCAAAGCGATCGAGAAAGTTGATCATGTTGACTCTGTTATGACCATT 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 1301 TCAGCAAAGCGATCGAGAAAGTTGATCATGTTGACTCTGTTATGACCATT 1350
BSNT_00975___ 1351 ACGCAGCCGACTGGTGAAAAAATCAAAGATTTATATATTGATAACCAGCT 1400
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU05650___yd 1351 ACGCAGCCGACTGGTAAAAAAATCAAAGATTTATATATTGATAACCAGCT 1400
BSNT_00975___ 1401 AGGATCGGTTTCAGACGGGCTGAATAAGACAGTAAAAGGGATTGCCGATG 1450
||||||||||||||||||||||.|||||||.||.||||||||||||||||
BSU05650___yd 1401 AGGATCGGTTTCAGACGGGCTGGATAAGACGGTGAAAGGGATTGCCGATG 1450
BSNT_00975___ 1451 TCCAAAGCGGATTAACGGATATAGAAAACGGACTGAATCAAATGGCAGGG 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 1451 TCCAAAGCGGATTAACGGATATAGAAAACGGACTGAATCAAATGGCAGGG 1500
BSNT_00975___ 1501 CAAACCGGCTCGGCCTCAAATGGAGGGTCTGGCGGTTCACTGGGCGATGC 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 1501 CAAACCGGCTCGGCCTCAAATGGAGGGTCTGGCGGTTCACTGGGCGATGC 1550
BSNT_00975___ 1551 GGCAGATGGCTTGGGCAAAATCAATCAGCAGCTGCAGCTCGTGAGCAAAC 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 1551 GGCAGATGGCTTGGGCAAAATCAATCAGCAGCTGCAGCTCGTGAGCAAAC 1600
BSNT_00975___ 1601 AGATTTCCCAAACCGGCAATACCGCACAGACCGTGCAGCAGCTTACGGCA 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 1601 AGATTTCCCAAACCGGCAATACCGCACAGACCGTGCAGCAGCTTACGGCA 1650
BSNT_00975___ 1651 ATCAGCGGACAGCTTGGCCAGATTCAAACCGGCCTTGAACAAGCGAACCA 1700
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 1651 ATAAGCGGACAGCTTGGCCAGATTCAAACCGGCCTTGAACAAGCGAACCA 1700
BSNT_00975___ 1701 ACAGCTCTCAGGCCAGCAGGCACAAGCCGGAACGCTGACAGAAAGCCTAA 1750
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU05650___yd 1701 ACAGCTCTCAGGCCAGCAGGCACAAGCCGGAACGCTGACAGAAAGCCTGA 1750
BSNT_00975___ 1751 AAAAGCTGTCCGAAGGCGTGAGGAGCGCAAATCAGGGCCTGACGAAAGTC 1800
|||||||||||||||||||||..|||||||||.|||||||||||||||||
BSU05650___yd 1751 AAAAGCTGTCCGAAGGCGTGAAAAGCGCAAATGAGGGCCTGACGAAAGTC 1800
BSNT_00975___ 1801 TCTGACGGTATTACAGCTTCCAGTGATATGTTAGAGGACATGAGCAAAAG 1850
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU05650___yd 1801 TCTGACGGTATTACAGCTTCCAGTGATATATTAGAGGACATGAGCAAAAG 1850
BSNT_00975___ 1851 TCCAACTGTAAGAGATACAGGCATATTCATTCCTGGTCAAGTAATGAAGG 1900
||||||||||||||||||.||||||||||||||||.||||||||||||||
BSU05650___yd 1851 TCCAACTGTAAGAGATACTGGCATATTCATTCCTGATCAAGTAATGAAGG 1900
BSNT_00975___ 1901 ACAAAGACTTTAAGAAGTCAATTGACCAGTATTCCTTTGCAGACGGCAAA 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 1901 ACAAAGACTTTAAGAAGTCAATTGACCAGTATTCCTTTGCAGACGGCAAA 1950
BSNT_00975___ 1951 GGTGTTCAATTAAGTGTCGTTCTGGATTCAAATCCGTACTCAGAACAAGC 2000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 1951 GGTGTTCAATTAAGTGTCGTTCTGGATTCAAATCCGTACTCAGAACAAGC 2000
BSNT_00975___ 2001 TATTGCGACAATAAACCAAATTAAAAAAGCGGTCGCAAACGAAGTTGACG 2050
||||.||||||||||||||||.||||||||.|||||||||||||||||||
BSU05650___yd 2001 TATTACGACAATAAACCAAATCAAAAAAGCTGTCGCAAACGAAGTTGACG 2050
BSNT_00975___ 2051 GCACTCCTTTGGAGGATGCACAGATCGTATACGGCGGGGTCACGAGTATG 2100
||||||||||||||.|||||||||||||.|||||||||||||||||||||
BSU05650___yd 2051 GCACTCCTTTGGAGAATGCACAGATCGTGTACGGCGGGGTCACGAGTATG 2100
BSNT_00975___ 2101 AATGCGGACTTAAAAGAGCTATCCACAACGGACTTCTCCAGAACAATGGT 2150
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU05650___yd 2101 AATGCGGACTTAAAGGAGCTATCCACAACGGACTTCTCCAGAACAATGGT 2150
BSNT_00975___ 2151 GATTATGATTATAGGCCTGTTTATCGTGTTAACCATTTTGTTCCGCTCAA 2200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 2151 GATTATGATTATAGGCCTGTTTATCGTGTTAACCATTTTGTTCCGCTCAA 2200
BSNT_00975___ 2201 TGATCATGCCGATTTATATGATCGCGTCATTGCTGCTGACGTACTATACG 2250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 2201 TGATCATGCCGATTTATATGATCGCGTCATTGCTGCTGACGTACTATACG 2250
BSNT_00975___ 2251 TCGATATCCATAACAGAATTAATTTTTGTAAACGGCTTAGGAAACGCCGG 2300
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU05650___yd 2251 TCGATATCCATAACAGAATTAATTTTTGTAAACGGCTTAGGAAACGCGGG 2300
BSNT_00975___ 2301 CGTCAGCTGGGCAGTGCCATTCTTCAGCTTTGTCATCTTGATCGCGTTAG 2350
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 2301 TGTCAGCTGGGCAGTGCCATTCTTCAGCTTTGTCATCTTGATCGCGTTAG 2350
BSNT_00975___ 2351 GGGTAGATTATTCGATCTTCTTGCTGGATCGATTTAAGGAAGAGGTGCAC 2400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 2351 GGGTAGATTATTCGATCTTCTTGCTGGATCGATTTAAGGAAGAGGTGCAC 2400
BSNT_00975___ 2401 CTTGGCATTGAGCAAGGTGTCGTCAGGTCAATGAGCAAAATGGGATCTGT 2450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 2401 CTTGGCATTGAGCAAGGTGTCGTCAGGTCAATGAGCAAAATGGGATCTGT 2450
BSNT_00975___ 2451 CATTATTACAGCTGCCATTATATTGGCCGGTACGTTCGCGGCGATGATGC 2500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 2451 CATTATTACAGCTGCCATTATATTGGCCGGTACGTTCGCGGCGATGATGC 2500
BSNT_00975___ 2501 CTTCAGGTGTCAATACACTGATGCAGGTGGCAAGTGTTATCATCATCGGG 2550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 2501 CTTCAGGTGTCAATACACTGATGCAGGTGGCAAGTGTTATCATCATCGGG 2550
BSNT_00975___ 2551 CTCTTGCTTTACGGCCTTGTTATACTTCCGCTCTTCATCCCGGCAATCAT 2600
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU05650___yd 2551 CTCTTGCTTTACGGCCTTGTCATACTTCCGCTCTTCATCCCGGCAATCAT 2600
BSNT_00975___ 2601 TGCGACCTTTGGAGAAGGAAACTGGTGGCCGTTCGGCAGGAAGAAAGGAA 2650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05650___yd 2601 TGCGACCTTTGGAGAAGGAAACTGGTGGCCGTTCGGCAGGAAGAAAGGAA 2650
BSNT_00975___ 2651 AAGAGTAA 2658
||||||||
BSU05650___yd 2651 AAGAGTAA 2658
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