Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00970 and BSU05620

See Amino acid alignment / Visit BSNT_00970 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:26
# Commandline: needle
#    -asequence dna-align/BSNT_00970___ydgF.1.22522.seq
#    -bsequence dna-align/BSU05620___ydgF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00970___ydgF-BSU05620___ydgF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00970___ydgF-BSU05620___ydgF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00970___ydgF
# 2: BSU05620___ydgF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1377
# Identity:    1362/1377 (98.9%)
# Similarity:  1362/1377 (98.9%)
# Gaps:           0/1377 ( 0.0%)
# Score: 6750.0
# 
#
#=======================================

BSNT_00970___      1 GTGACAGACGACATGACGAAAGACAATATAAATCAGCAAACGTTGCAGAG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd      1 GTGACAGACGACATGACGAAAGACAATATAAATCAGCAAACGTTGCAGAG     50

BSNT_00970___     51 AGGCTTGAAAAACAGGCATATCCAGCTCATCGCCATCGGCGGAGCCATTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd     51 AGGCTTGAAAAACAGGCATATCCAGCTCATCGCCATCGGCGGAGCCATTG    100

BSNT_00970___    101 GGACAGGCTTATTTCTCGGCTCTGGCAAATCGATTCATTTTGCCGGACCT    150
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU05620___yd    101 GGACAGGCTTATTTCTCGGCTCGGGCAAATCGATTCATTTTGCCGGACCT    150

BSNT_00970___    151 TCGATTTTATTTGCTTATATGATCACAGGGATTATTTGCTTCTTAATTAT    200
                     ||||||||||||||||||||||||||||||||.||||||||.||||||||
BSU05620___yd    151 TCGATTTTATTTGCTTATATGATCACAGGGATCATTTGCTTTTTAATTAT    200

BSNT_00970___    201 GAGATCGCTGGGTGAACTGCTGTTATCAAACTTGAACTATCACTCTTTTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd    201 GAGATCGCTGGGTGAACTGCTGTTATCAAACTTGAACTATCACTCTTTTG    250

BSNT_00970___    251 TGGACTTTGTACAAGACTACCTAGGCGATATGGCAGCATTTATCACCGGC    300
                     ||||.||||||||||||||||||||||||||||||||.||||||||||||
BSU05620___yd    251 TGGATTTTGTACAAGACTACCTAGGCGATATGGCAGCTTTTATCACCGGC    300

BSNT_00970___    301 TGGACATATTGGTTCTGCTGGATTTCCATTGCGATGGCTGATCTGACAGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd    301 TGGACATATTGGTTCTGCTGGATTTCCATTGCGATGGCTGATCTGACAGC    350

BSNT_00970___    351 AGTCGGGCTCTACACTCAATATTGGCTCCCGGGTGTGCCGCAATGGGTGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd    351 AGTCGGGCTCTACACTCAATATTGGCTCCCGGGTGTGCCGCAATGGGTGC    400

BSNT_00970___    401 CCGGCTTAATCGCTCTAATTATTTTACTGATTATGAACCTGGCGACAGTC    450
                     |.||||||||||||||.||||||||||||||||||||.||||||||||||
BSU05620___yd    401 CTGGCTTAATCGCTCTTATTATTTTACTGATTATGAATCTGGCGACAGTC    450

BSNT_00970___    451 AAGCTATTTGGAGAATTAGAATTTTGGTTTGCTTTGATTAAAGTCATTGC    500
                     |||||.|||||||||||||||||||||||.||||||||||||||||||||
BSU05620___yd    451 AAGCTTTTTGGAGAATTAGAATTTTGGTTCGCTTTGATTAAAGTCATTGC    500

BSNT_00970___    501 CATTTTGGCGTTAATCGTCATTGGCCTTGTGATGATTTTCAAAGGCTTTT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd    501 CATTTTGGCGTTAATCGTCATTGGCCTTGTGATGATTTTCAAAGGCTTTT    550

BSNT_00970___    551 CCACAAGCTCAGGAGTGTCCAGCTTCACAAATCTCTGGAGCCACGGAGGC    600
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU05620___yd    551 CCACAAGCTCAGGAGTGTCCAGCTTCACAAACCTCTGGAGCCACGGAGGC    600

BSNT_00970___    601 CTGTTCCCGAATGGCATGCACGGGTTTATCCTCTCGTTCCAGATGGTTGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd    601 CTGTTCCCGAATGGCATGCACGGGTTTATCCTCTCGTTCCAGATGGTTGT    650

BSNT_00970___    651 GTTTGCTTTTGTCGGCATTGAGCTTGTCGGGCTTACAGCCGGTGAAACAG    700
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU05620___yd    651 GTTTGCTTTTGTCGGCATTGAGCTTGTCGGGCTTACGGCCGGTGAAACAG    700

BSNT_00970___    701 AAAACCCTGAAAAAGTAATCCCTAAGGCGATCAACAATATTCCTGTCCGT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd    701 AAAACCCTGAAAAAGTAATCCCTAAGGCGATCAACAATATTCCTGTCCGT    750

BSNT_00970___    751 GTGCTGCTTTTTTATATCGGGGCTCTTCTCGTGATTATGAGCATCTATCC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd    751 GTGCTGCTTTTTTATATCGGGGCTCTTCTCGTGATTATGAGCATCTATCC    800

BSNT_00970___    801 TTGGGATGTCATCAATCCCAGCGAAAGCCCATTCGTACAAGTATTTGTCG    850
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd    801 TTGGGATATCATCAATCCCAGCGAAAGCCCATTCGTACAAGTATTTGTCG    850

BSNT_00970___    851 CTGTTGGCATCGTCGGGGCTGCAAGTATTATCAACTTTGTTGTATTGACT    900
                     |||||||||||||||||||||||||||||||||||||||||||.|||||.
BSU05620___yd    851 CTGTTGGCATCGTCGGGGCTGCAAGTATTATCAACTTTGTTGTGTTGACA    900

BSNT_00970___    901 TCCGCTGCTTCAGCATGCAACAGCGCTGTATTCAGTACAAGCCGTATGGT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd    901 TCCGCTGCTTCAGCATGCAACAGCGCTGTATTCAGTACAAGCCGTATGGT    950

BSNT_00970___    951 CTATTCCCTGGCGAAAGATCACAATGCGCCTGAGTCAATGGCGAAACTGA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd    951 CTATTCCCTGGCGAAAGATCACAATGCGCCTGAGTCAATGGCGAAACTGA   1000

BSNT_00970___   1001 CTCAGCGTAAAGTGCCTAGAAATGCTTTATTCTTTTCAGCTATCGTGATT   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd   1001 CTCAGCGTAAAGTGCCTAGAAATGCTTTATTCTTTTCAGCTATCGTGATT   1050

BSNT_00970___   1051 TTAATCGGTGTTACGTTAAACTACATCATGCCAGAAGGCGTATTCACCCT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd   1051 TTAATCGGTGTTACGTTAAACTACATCATGCCAGAAGGCGTATTCACCCT   1100

BSNT_00970___   1101 GATCACAAGTATTTCAACCGTATGCTTTATCTACATTTGGGGGATTACGG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd   1101 GATCACAAGTATTTCAACCGTATGCTTTATCTACATTTGGGGGATTACGG   1150

BSNT_00970___   1151 TCATCTGCCATATGAAATACCGCAAAACAAGACCTGAATTAGCGAAAACA   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd   1151 TCATCTGCCATATGAAATACCGCAAAACAAGACCTGAATTAGCGAAAACA   1200

BSNT_00970___   1201 AACAAGTTTAAGCTTCCGCTTTATCCGTTTACAAATTACCTGATTCTTGC   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd   1201 AACAAGTTTAAGCTTCCGCTTTATCCGTTTACAAATTACCTGATTCTTGC   1250

BSNT_00970___   1251 GTTCCTGGCGTTTGTTCTGGTTGTGCTGGCACTGGCACAGGATACTCGTG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd   1251 GTTCCTGGCGTTTGTTCTGGTTGTGCTGGCACTGGCACAGGATACTCGTG   1300

BSNT_00970___   1301 TTTCCTTATTTGTCACACCGGTTTGGTTTATTTTGCTGATTGTGATTTAT   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05620___yd   1301 TTTCCTTATTTGTCACACCGGTTTGGTTTATTTTGCTGATTGTGATTTAT   1350

BSNT_00970___   1351 AAAGTGAGAAAAGCGAAGCATCAATAA   1377
                     |||||||||||||||||||||||||||
BSU05620___yd   1351 AAAGTGAGAAAAGCGAAGCATCAATAA   1377


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