Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00964 and BSU05580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:25
# Commandline: needle
# -asequence dna-align/BSNT_00964___ydgC.1.22522.seq
# -bsequence dna-align/BSU05580___ydgC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00964___ydgC-BSU05580___ydgC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00964___ydgC-BSU05580___ydgC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00964___ydgC
# 2: BSU05580___ydgC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 600
# Identity: 574/600 (95.7%)
# Similarity: 574/600 (95.7%)
# Gaps: 12/600 ( 2.0%)
# Score: 2798.5
#
#
#=======================================
BSNT_00964___ 1 TTGAAAAGTAAAAAAGGACGTAAAGGAGAAGAAAGCCGGAAACGGTTACT 50
||||||| |||||||||.|||||||||.|||||.|||||
BSU05580___yd 1 TTGAAAA------------GTAAAGGAGTAGAAAGCCGAAAACGATTACT 38
BSNT_00964___ 51 CAAAGCTGCCGCTAATGAATTTTCGATTCGGGGATTCCATGACGCGAAGG 100
.||||||||||||||||||||||||.||||||||||||||||||||||||
BSU05580___yd 39 TAAAGCTGCCGCTAATGAATTTTCGGTTCGGGGATTCCATGACGCGAAGG 88
BSNT_00964___ 101 TAAGTGAAATTGTGAAAAAAGCTGGGTTCACGCAGCCTTCATTTTACCTG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05580___yd 89 TAAGTGAAATTGTGAAAAAAGCTGGGTTCACGCAGCCTTCATTTTACCTG 138
BSNT_00964___ 151 TACTTTCAAAGCAAAGAAGCCATCTTTGCCGAGTTAATAACCGATTTTCA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05580___yd 139 TACTTTCAAAGCAAAGAAGCCATCTTTGCCGAGTTAATAACCGATTTTCA 188
BSNT_00964___ 201 CTCTCGGGTCAGAAAGCTGACAGAGTCACTTCTTCTGGAAAACGGATTAA 250
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU05580___yd 189 CTCTCGAGTCAGAAAGCTGACAGAGTCACTTCTTCTGGAAAACGGATTAA 238
BSNT_00964___ 251 ACACGGAGGATGTGTCAAAACGGGTACTGCTAGCTGTAGAGACTGTTTTT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05580___yd 239 ACACGGAGGATGTGTCAAAACGGGTACTGCTAGCTGTAGAGACTGTTTTT 288
BSNT_00964___ 301 CAATTTTTAGCTGAGGACAAGGATTTAACCAAGATCGGCTTTTTTCTCAA 350
||||||||.|.|||||||||||||||||||||||||||||||||||||||
BSU05580___yd 289 CAATTTTTGGATGAGGACAAGGATTTAACCAAGATCGGCTTTTTTCTCAA 338
BSNT_00964___ 351 CCCGGAAGCAAAACAAATGAAAAAAGACTTGGCGATGGTTTTGAAAGAGA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05580___yd 339 CCCGGAAGCAAAACAAATGAAAAAAGACTTGGCGATGGTTTTGAAAGAGA 388
BSNT_00964___ 401 ACTTAAAAGCAGAACAGCGGCTTGGCTATTTTCACTCTGAGCTGGATATG 450
|||||.||||||||||||||||||||||||||||||||||.|||||||||
BSU05580___yd 389 ACTTAGAAGCAGAACAGCGGCTTGGCTATTTTCACTCTGAACTGGATATG 438
BSNT_00964___ 451 GAAACTGTCGCTGAGTGTTTGATCGGCATGATTGAACATTTAACCGATTC 500
|||||||||||||||||||||.|||||||||||||||||||||||||.||
BSU05580___yd 439 GAAACTGTCGCTGAGTGTTTGGTCGGCATGATTGAACATTTAACCGAATC 488
BSNT_00964___ 501 ATTTTTGTTAACCGGAATCAAAGATCCGGCAAGCCTCGCAGCAGAGGTTG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05580___yd 489 ATTTTTGTTAACCGGAATCAAAGATCCGGCAAGCCTCGCAGCAGAGGTTG 538
BSNT_00964___ 551 TGAATCTTTTAATATACGGGATGCTTCCGAAAGGGAATGACGTAAGATGA 600
|||||||||||||.||||||||||||||||||||||||||.|||||||||
BSU05580___yd 539 TGAATCTTTTAATTTACGGGATGCTTCCGAAAGGGAATGATGTAAGATGA 588
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