Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00963 and BSU05560

See Amino acid alignment / Visit BSNT_00963 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:25
# Commandline: needle
#    -asequence dna-align/BSNT_00963___ydgA.1.22522.seq
#    -bsequence dna-align/BSU05560___ydgA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00963___ydgA-BSU05560___ydgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00963___ydgA-BSU05560___ydgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00963___ydgA
# 2: BSU05560___ydgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     237/243 (97.5%)
# Similarity:   237/243 (97.5%)
# Gaps:           0/243 ( 0.0%)
# Score: 1161.0
# 
#
#=======================================

BSNT_00963___      1 ATGCCATATCAAATTAACATCGCAAATATTAAGATCAACGGCGTCACGCA     50
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU05560___yd      1 ATGCCATATCAAATTAATATCGCAAATATTAAGATCAACGGCGTCACGCA     50

BSNT_00963___     51 AAACGGAAATATAGATGTCGGCCCGACTGTGCACAACAGCCATACTGCGA    100
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU05560___yd     51 AAACGGAAATATAGATGTCGGTCCGACTGTGCACAACAGCCATACTGCGA    100

BSNT_00963___    101 ACAGCAAATATTTTGGAGCAAACTTTTCCTTAGGGGATCTTTCGCCTACG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05560___yd    101 ACAGCAAATATTTTGGAGCAAACTTTTCCTTAGGGGATCTTTCGCCTACG    150

BSNT_00963___    151 TCTTCACTTTTGAACACTGGAAATATTGATTCAGACGTTAGTGACCAAGA    200
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU05560___yd    151 TCTTCACTTTTAAACACTGGAAATATTGATTCAGACGTTAGTGACCAAGA    200

BSNT_00963___    201 CCAAATCGGAAACCCTTCTGCACCGATCGCAAATCAAATTTAA    243
                     |||||||||||||||||||||.|||||..||||||||||||||
BSU05560___yd    201 CCAAATCGGAAACCCTTCTGCGCCGATTTCAAATCAAATTTAA    243


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