Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00957 and BSU05529

See Amino acid alignment / Visit BSNT_00957 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:25
# Commandline: needle
#    -asequence dna-align/BSNT_00957.1.22522.seq
#    -bsequence dna-align/BSU05529___ydzR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00957-BSU05529___ydzR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00957-BSU05529___ydzR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00957
# 2: BSU05529___ydzR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity:     225/231 (97.4%)
# Similarity:   225/231 (97.4%)
# Gaps:           0/231 ( 0.0%)
# Score: 1101.0
# 
#
#=======================================

BSNT_00957         1 ATGATGAAATTCCCAGTTTATATTCATTCGATATCCGGGAACAGCGTTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05529___yd      1 ATGATGAAATTCCCAGTTTATATTCATTCGATATCCGGGAACAGCGTTTT     50

BSNT_00957        51 TAATAACGGATTTGCAGTTTCCATCAGCCCGTTCTCTGTGTCTAAAACAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05529___yd     51 TAATAACGGATTTGCAGTTTCCATCAGCCCGTTCTCTGTGTCTAAAACAA    100

BSNT_00957       101 CAGAGGGTTCCGGTGGGAGTAATACAGGTTTGGTTTTTGAATCCAATACT    150
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU05529___yd    101 CAGAGGGTTCCGGTGGGAGTAATACAGGTTTGGTTTTTGAATCCAATGCT    150

BSNT_00957       151 TTAAGCCAAACAAGCTCCGCCAATCAAGCCCTACATGTTACAAATGCGGT    200
                     |||||||||||||||||||||||||||||||.|.||||.|||.|||||.|
BSU05529___yd    151 TTAAGCCAAACAAGCTCCGCCAATCAAGCCCAAAATGTAACATATGCGAT    200

BSNT_00957       201 CCAAGAGCTGCTTTCCAAGCTTTTAGCGTAA    231
                     |||||||||||||||||||||||||||||||
BSU05529___yd    201 CCAAGAGCTGCTTTCCAAGCTTTTAGCGTAA    231


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