Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00947 and BSU05510

See Amino acid alignment / Visit BSNT_00947 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:24
# Commandline: needle
#    -asequence dna-align/BSNT_00947___ydfQ.1.22522.seq
#    -bsequence dna-align/BSU05510___ydfQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00947___ydfQ-BSU05510___ydfQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00947___ydfQ-BSU05510___ydfQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00947___ydfQ
# 2: BSU05510___ydfQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity:     329/339 (97.1%)
# Similarity:   329/339 (97.1%)
# Gaps:           0/339 ( 0.0%)
# Score: 1605.0
# 
#
#=======================================

BSNT_00947___      1 ATGAAAGAGATGACAGAATTACATTCATTAGATTCTATAGATAATTTTAT     50
                     ||||||||||||||||.||||||||||||||.|||||||||.||.|||||
BSU05510___yd      1 ATGAAAGAGATGACAGGATTACATTCATTAGTTTCTATAGAAAACTTTAT     50

BSNT_00947___     51 CAAACAGCACAAATTCAGTTTTATTTATATATCAAGGCCTGCCTGTACAG    100
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU05510___yd     51 CAAACAGCACAAATTCAGTTTTATTTATATATCAAGGCCTGGCTGTACAG    100

BSNT_00947___    101 TATGTCACGCAGTCCTGCCCCAGCTCAGAATAGTATTGGATCAGTTTCCA    150
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU05510___yd    101 TATGTCACGCAGTTCTGCCCCAGCTCAGAATAGTATTGGATCAGTTTCCA    150

BSNT_00947___    151 AACATCAAATTGGGGCATATCAATGCTGACGATGTAGCAGAGGTCGCTGG    200
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU05510___yd    151 AACATCAAATTGGGGCATATCAATGCTGACGATGTAGCAGAGGTCGCCGG    200

BSNT_00947___    201 CAGATTTTCAGTTTTCACCGTTCCTATGCTTCTTTTGTTCATTGATGGGA    250
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU05510___yd    201 CAGATTTTCAGTTTTCACCGTTCCTGTGCTTCTTTTGTTCATTGATGGGA    250

BSNT_00947___    251 CTGAGTTTCTAAGAGAAGCCCGTTTTGTTCATTTTAAACAGCTTGAACAA    300
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU05510___yd    251 CTGAGTTTCTAAGAGAAGCCCGTTTTGTTCATTTTGAACAGCTTGAACAA    300

BSNT_00947___    301 AAGCTGAAAAGGGTTTATCGATTATATGAAGGTGAATAA    339
                     ||||||||||||||||||||||||||||||||.||||||
BSU05510___yd    301 AAGCTGAAAAGGGTTTATCGATTATATGAAGGCGAATAA    339


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