Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00946 and BSU05500

See Amino acid alignment / Visit BSNT_00946 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:24
# Commandline: needle
#    -asequence dna-align/BSNT_00946___ydfP.1.22522.seq
#    -bsequence dna-align/BSU05500___ydfP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00946___ydfP-BSU05500___ydfP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00946___ydfP-BSU05500___ydfP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00946___ydfP
# 2: BSU05500___ydfP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 390
# Identity:     388/390 (99.5%)
# Similarity:   388/390 (99.5%)
# Gaps:           0/390 ( 0.0%)
# Score: 1932.0
# 
#
#=======================================

BSNT_00946___      1 ATGGAAGATGCAGGACTGTTGCTTATTCGTATAATGATTGGTGTAGTGTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU05500___yd      1 ATGGAAGATGCAGGACTGTTGCTTATTCGTATAATGATTGGTGTGGTGTT     50

BSNT_00946___     51 TTTGTTTTATGGCACACAAAAATTATTCGGCTGGTTTGGCGGATACGGGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05500___yd     51 TTTGTTTTATGGCACACAAAAATTATTCGGCTGGTTTGGCGGATACGGGA    100

BSNT_00946___    101 TTAAAGGAACCGGACAATGGTTCGAATCAATTGGGGTGAAACCAGGAAAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05500___yd    101 TTAAAGGAACCGGACAATGGTTCGAATCAATTGGGGTGAAACCAGGAAAC    150

BSNT_00946___    151 GTTGCGGCCGCTCTATCAGGTCTTGGGGAGTTAGTAAGCGGAATTCTATT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05500___yd    151 GTTGCGGCCGCTCTATCAGGTCTTGGGGAGTTAGTAAGCGGAATTCTATT    200

BSNT_00946___    201 TATTTTAGGCGTATTCCTCCCGCTTGGAGCTGCTATCATAACGATCATCA    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU05500___yd    201 TATTTTAGGCGTATTCCTCCCGCTTGGAGCTGCTATCATAACAATCATCA    250

BSNT_00946___    251 TGTTAGGTGCTATCGTAAAAGTCCATGGAGCGAAAGGTTTTGCGAATGGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05500___yd    251 TGTTAGGTGCTATCGTAAAAGTCCATGGAGCGAAAGGTTTTGCGAATGGC    300

BSNT_00946___    301 GCCGGAGGTTTTGAATATAACCTGGTGCTCATTGCAGTTTCCATAGGGGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05500___yd    301 GCCGGAGGTTTTGAATATAACCTGGTGCTCATTGCAGTTTCCATAGGGGT    350

BSNT_00946___    351 TGCACTCATCGGTTCAGGAGCTTACGCTTTGCATTTTTAA    390
                     ||||||||||||||||||||||||||||||||||||||||
BSU05500___yd    351 TGCACTCATCGGTTCAGGAGCTTACGCTTTGCATTTTTAA    390


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