Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00942 and BSU05470

See Amino acid alignment / Visit BSNT_00942 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:24
# Commandline: needle
#    -asequence dna-align/BSNT_00942___ydfM.1.22522.seq
#    -bsequence dna-align/BSU05470___ydfM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00942___ydfM-BSU05470___ydfM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00942___ydfM-BSU05470___ydfM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00942___ydfM
# 2: BSU05470___ydfM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 894
# Identity:     885/894 (99.0%)
# Similarity:   885/894 (99.0%)
# Gaps:           0/894 ( 0.0%)
# Score: 4389.0
# 
#
#=======================================

BSNT_00942___      1 ATGGCAAGTGAAAGAGAACAAATAAGCAGAAAAGTTGCTTTGATAGCATT     50
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU05470___yd      1 ATGGCAAGTGAAAGAGAACAAATAAGCAGAAAAGTTGCTTTGATTGCATT     50

BSNT_00942___     51 GATCGCCAATCTCATCTTAATGGCAGGAAAGGTCTTTTTTGGGCTGGTAG    100
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU05470___yd     51 GATCGCCAATCTGATCTTAATGGCAGGAAAGGTCTTTTTTGGGCTGGTAG    100

BSNT_00942___    101 GCGATAGTGAAGCCGTGTTTGCAGACGGAATACATTCCGCGGCAGATGTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05470___yd    101 GCGATAGTGAAGCCGTGTTTGCAGACGGAATACATTCCGCGGCAGATGTC    150

BSNT_00942___    151 GTTGCTTCGATTGCAGTCTTGGCAGTGATCGGAATTTCCAATAAACCGCC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05470___yd    151 GTTGCTTCGATTGCAGTCTTGGCAGTGATCGGAATTTCCAATAAACCGCC    200

BSNT_00942___    201 CGATCAAGACCATCCTTTTGGTCACGGAAAAGCTGAAGTCATTAGTGAGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05470___yd    201 CGATCAAGACCATCCTTTTGGTCACGGAAAAGCTGAAGTCATTAGTGAGG    250

BSNT_00942___    251 CGATTGTAGGAATTATCTTAGTGATCGTATCCGTTTATATCCTCATAGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05470___yd    251 CGATTGTAGGAATTATCTTAGTGATCGTATCCGTTTATATCCTCATAGAA    300

BSNT_00942___    301 GCGATTCTGTCCTTTGTTAAAGGGCCAAGCGTTCCCCAATACAGCGCATT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05470___yd    301 GCGATTCTGTCCTTTGTTAAAGGGCCAAGCGTTCCCCAATACAGCGCATT    350

BSNT_00942___    351 GTTTGCGGCTCTGATTTCGTACGTGGCTAAGGAAATCTTATATCGTTATT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05470___yd    351 GTTTGCGGCTCTGATTTCGTACGTGGCTAAGGAAATCTTATATCGTTATT    400

BSNT_00942___    401 CTATAAAGCAAGGGGAAAAATGGAACAGCAAAGCGATTATAGCGATTGCG    450
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU05470___yd    401 CTATAAAGCAAGGGAAAAAATGGAACAGCAAAGCGATTATAGCGATTGCG    450

BSNT_00942___    451 TACGATCATAAAGGCGATATCGTTGCCTCTCTTGCCGCTTTTATCGGCGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05470___yd    451 TACGATCATAAAGGCGATATCGTTGCCTCTCTTGCCGCTTTTATCGGCGT    500

BSNT_00942___    501 CCTGTTGGCTATCATCGGGAACACCCGCGGATGGCCCTATCTGTTGTACG    550
                     ||||||||||||||||||.||||.|||.||||||.|||||||||||||||
BSU05470___yd    501 CCTGTTGGCTATCATCGGAAACAGCCGTGGATGGTCCTATCTGTTGTACG    550

BSNT_00942___    551 CCGATGCCATTGCCAGTGCAATCGTTGCTTACCTCATTTTTAAGATTTCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05470___yd    551 CCGATGCCATTGCCAGTGCAATCGTTGCTTACCTCATTTTTAAGATTTCA    600

BSNT_00942___    601 ATGGAATTAATCAGGCCGTCTGTTGATGTGCTCATGGAAAAGAGTGTTGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05470___yd    601 ATGGAATTAATCAGGCCGTCTGTTGATGTGCTCATGGAAAAGAGTGTTGA    650

BSNT_00942___    651 TCCCGAGCTGATAGAGGAATATAAAGCTGTTATTTTTCAATGTGATCAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU05470___yd    651 TCCCGAGCTGATAGAGGAATATAAAGCTGTTATTTTTCAATGTGATCAGG    700

BSNT_00942___    701 TAAAACGAATTGATAGAATCCGCGCGCGAGAACATGGCCACTATAAATTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05470___yd    701 TAAAACGAATTGATAGAATCCGCGCGCGAGAACATGGCCACTATAAATTG    750

BSNT_00942___    751 CTTGATGTCCGTTTATCTTTGGATCATGATTTGACAATTAAGCAGGGACA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05470___yd    751 CTTGATGTCCGTTTATCTTTGGATCATGATTTGACAATTAAGCAGGGACA    800

BSNT_00942___    801 CGACATCGCCCGCGAAATTCGAAATGAAATCAAAAGACAGTTTTCAGATG    850
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU05470___yd    801 CGACATTGCCCGCGAAATTCGAAATGAAATCAAAAGACAGTTTTCAGATG    850

BSNT_00942___    851 TAGAAGAAGTGCTCATCCATGTAAATCCTTATTTCGAAGAATGA    894
                     ||||||||||||||||||||||||||||||||||||||||||||
BSU05470___yd    851 TAGAAGAAGTGCTCATCCATGTAAATCCTTATTTCGAAGAATGA    894


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