Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00928 and BSU05408

See Amino acid alignment / Visit BSNT_00928 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:22
# Commandline: needle
#    -asequence dna-align/BSNT_00928.1.22522.seq
#    -bsequence dna-align/BSU05408___ydzP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00928-BSU05408___ydzP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00928-BSU05408___ydzP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00928
# 2: BSU05408___ydzP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity:     174/180 (96.7%)
# Similarity:   174/180 (96.7%)
# Gaps:           6/180 ( 3.3%)
# Score: 870.0
# 
#
#=======================================

BSNT_00928         1 ------ATGTATTGGTTTCTAGGTGCTTTATTATATTTTCTGATCGGTAC     44
                           ||||||||||||||||||||||||||||||||||||||||||||
BSU05408___yd      1 ATGAACATGTATTGGTTTCTAGGTGCTTTATTATATTTTCTGATCGGTAC     50

BSNT_00928        45 TTATATATTCATTAGAGTCACTAGAGACAGCCAATCAGGCTCATGGATAC     94
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05408___yd     51 TTATATATTCATTAGAGTCACTAGAGACAGCCAATCAGGCTCATGGATAC    100

BSNT_00928        95 TGCTTGCATTAGCAGCTCCACTCATCATTGCTGGCTACCCTTATTTTTAT    144
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05408___yd    101 TGCTTGCATTAGCAGCTCCACTCATCATTGCTGGCTACCCTTATTTTTAT    150

BSNT_00928       145 TCAAAGAAGCTTCTTTCCAAAAGACGCTGA    174
                     ||||||||||||||||||||||||||||||
BSU05408___yd    151 TCAAAGAAGCTTCTTTCCAAAAGACGCTGA    180


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