Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00917 and BSU05340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:21
# Commandline: needle
# -asequence dna-align/BSNT_00917___ydfA.1.22522.seq
# -bsequence dna-align/BSU05340___ydfA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00917___ydfA-BSU05340___ydfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00917___ydfA-BSU05340___ydfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00917___ydfA
# 2: BSU05340___ydfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1308
# Identity: 1299/1308 (99.3%)
# Similarity: 1299/1308 (99.3%)
# Gaps: 0/1308 ( 0.0%)
# Score: 6459.0
#
#
#=======================================
BSNT_00917___ 1 TTGACATCAATGATTTTGGCAGTATTCATCTTTTTATTAACTCTAGTATT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 1 TTGACATCAATGATTTTGGCAGTATTCATCTTTTTATTAACTCTAGTATT 50
BSNT_00917___ 51 GGTCATATGGCAGCCGAAAAATTTATCTATAGGGTGGTCAGCCTGTGGAG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 51 GGTCATATGGCAGCCGAAAAATTTATCTATAGGGTGGTCAGCCTGTGGAG 100
BSNT_00917___ 101 GCGCAGTTTTAGCTCTAATAGCAGGTGTTGTCAATTTTCATGATGTGTTA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 101 GCGCAGTTTTAGCTCTAATAGCAGGTGTTGTCAATTTTCATGATGTGTTA 150
BSNT_00917___ 151 ACTGTGACAGGGATTGTTTGGAATGCGACCTTGGCTTTTGTGGCCATCAT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 151 ACTGTGACAGGGATTGTTTGGAATGCGACCTTGGCTTTTGTGGCCATCAT 200
BSNT_00917___ 201 ACTGATATCGTTAATTCTTGATAATATCGGTTTCTTTGAATGGGCAGCGC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 201 ACTGATATCGTTAATTCTTGATAATATCGGTTTCTTTGAATGGGCAGCGC 250
BSNT_00917___ 251 TTCATATGGCTAAGGCTGCAAAAGGAAACGGTGTGCGGATGTTCGTTTAT 300
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU05340___yd 251 TTCATATGGCTAAGGCTGCAAAAGGATACGGTGTGCGGATGTTCGTTTAT 300
BSNT_00917___ 301 GTATCTCTATTAGGAGCTATTGTCGCCGCGTTATTTGCAAATGACGGTGC 350
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU05340___yd 301 GTATCTCTATTAGGAGCTATCGTCGCCGCGTTATTTGCAAATGACGGTGC 350
BSNT_00917___ 351 AGCTCTTATATTGACACCAATCGTATTAGCGATGGTCAGAGCATTACATT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 351 AGCTCTTATATTGACACCAATCGTATTAGCGATGGTCAGAGCATTACATT 400
BSNT_00917___ 401 TTAATGAAAAATTAGTTTTTCCTTTTATCATTGCCAGCGGATTTATTGCG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 401 TTAATGAAAAATTAGTTTTTCCTTTTATCATTGCCAGCGGATTTATTGCG 450
BSNT_00917___ 451 GATACCACTTCGCTTCCTTTAGTAGTGAGCAATTTGGTCAACATTGTTTC 500
||||||||||||||||||||.|||||.|||||||||||||||||||||||
BSU05340___yd 451 GATACCACTTCGCTTCCTTTTGTAGTAAGCAATTTGGTCAACATTGTTTC 500
BSNT_00917___ 501 AGCGGACTATTTTCATATTACGTTTATTGATTATGCATCCAGAATGGTTG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 501 AGCGGACTATTTTCATATTACGTTTATTGATTATGCATCCAGAATGGTTG 550
BSNT_00917___ 551 TCCCGTACTTGTTTTCGCTGCTGGCGAGCATCATTGTACTTTACCTTTTC 600
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 551 TCCCGTACCTGTTTTCGCTGCTGGCGAGCATCATTGTACTTTACCTTTTC 600
BSNT_00917___ 601 TTTAGAAAAAGCATACCAAAACGCTATGATCTGACTGAGGTTAAAAAACC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 601 TTTAGAAAAAGCATACCAAAACGCTATGATCTGACTGAGGTTAAAAAACC 650
BSNT_00917___ 651 TGTTGAAGCAATTAAAGATCAAAACATGTTCAGACTGTCATGGTATATCT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 651 TGTTGAAGCAATTAAAGATCAAAACATGTTCAGACTGTCATGGTATATCT 700
BSNT_00917___ 701 TAGGGCTGCTGTTAATTGGATATTTTGCAAGTGAATTTTTTTCTATCCCT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 701 TAGGGCTGCTGTTAATTGGATATTTTGCAAGTGAATTTTTTTCTATCCCT 750
BSNT_00917___ 751 GTATCAGTGGTAGCGGGCAGCATTGCGATCATTTTCTTAATCGCTGCGCA 800
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU05340___yd 751 GTATCAGTGGTAGCGGGCAGCATTGCAATCATTTTCTTAATCGCTGCGCA 800
BSNT_00917___ 801 AAAGAGTCCGGCCGTCCATACAAAGAAAGTGGTGAAAGAGGCGCCATGGG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 801 AAAGAGTCCGGCCGTCCATACAAAGAAAGTGGTGAAAGAGGCGCCATGGG 850
BSNT_00917___ 851 CTATCGTATTCTTTTCAATTGGCATGTACGTTGTTGTGTATGGTGTCCGA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 851 CTATCGTATTCTTTTCAATTGGCATGTACGTTGTTGTGTATGGTGTCCGA 900
BSNT_00917___ 901 AATGCCGGATTAACGGATGTCCTTTCAGATGTGATTCAAGCCGCAGCTGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 901 AATGCCGGATTAACGGATGTCCTTTCAGATGTGATTCAAGCCGCAGCTGA 950
BSNT_00917___ 951 TCAAGGATTGTTTGCTGGGACAATTGGAATGGGCTTTATTGCGGCGATTC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 951 TCAAGGATTGTTTGCTGGGACAATTGGAATGGGCTTTATTGCGGCGATTC 1000
BSNT_00917___ 1001 TTTCTTCCATTATGAATAACTTGCCGACTGTTATGATTGACGCATTGGCT 1050
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU05340___yd 1001 TTTCTTCCATTATGAATAACTTGCCGACTGTTATGATTGACGCATTGGCC 1050
BSNT_00917___ 1051 ATTGCCGGTACAGACACACATGGGATGATGAGAGAAGCGCTTATTTATGC 1100
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU05340___yd 1051 ATTGCCGGTACAGATACACATGGGATGATGAGAGAAGCGCTTATTTATGC 1100
BSNT_00917___ 1101 AAATGTGATCGGTTCAGATTTAGGGCCTAAAATAACACCGATTGGTTCCT 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 1101 AAATGTGATCGGTTCAGATTTAGGGCCTAAAATAACACCGATTGGTTCCT 1150
BSNT_00917___ 1151 TGGCGACATTATTATGGCTTCATGTTCTTTCGCACAAAGGTATGAAGATT 1200
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 1151 TAGCGACATTATTATGGCTTCATGTTCTTTCGCACAAAGGTATGAAGATT 1200
BSNT_00917___ 1201 TCCTGGGGCACGTATTTTAAAACAGGAATTATCCTCACGATACCCACTTT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 1201 TCCTGGGGCACGTATTTTAAAACAGGAATTATCCTCACGATACCCACTTT 1250
BSNT_00917___ 1251 ATTGATCACACTTGTCGGCCTGTATATTTGGCTGCTGATAATCCATTCTT 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd 1251 ATTGATCACACTTGTCGGCCTGTATATTTGGCTGCTGATAATCCATTCTT 1300
BSNT_00917___ 1301 GTTTCTAA 1308
||||||||
BSU05340___yd 1301 GTTTCTAA 1308
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