Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00912 and BSU05280

See Amino acid alignment / Visit BSNT_00912 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:21
# Commandline: needle
#    -asequence dna-align/BSNT_00912___ydeO.1.22522.seq
#    -bsequence dna-align/BSU05280___ydeO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00912___ydeO-BSU05280___ydeO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00912___ydeO-BSU05280___ydeO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00912___ydeO
# 2: BSU05280___ydeO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 873
# Identity:     860/873 (98.5%)
# Similarity:   860/873 (98.5%)
# Gaps:           0/873 ( 0.0%)
# Score: 4248.0
# 
#
#=======================================

BSNT_00912___      1 ATGAATACAACCAAAAAACATAAGAAATTTAAAGCGAAAATGATTTTCCA     50
                     |||||||||.|||||||||||||||||||||||||||||||||||.||||
BSU05280___yd      1 ATGAATACACCCAAAAAACATAAGAAATTTAAAGCGAAAATGATTCTCCA     50

BSNT_00912___     51 AATCATCATGGTTATCATTGGAGGAATCATAGCGGCGTATGGACTAGAAA    100
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU05280___yd     51 AATCATCATGGTTATCATTGGAGGAATCATAGCGGCATATGGACTAGAAA    100

BSNT_00912___    101 CAGTGCTCATTCCAAACAGTGTATCTGATGGAGGGGTGACGGGTCTGAGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU05280___yd    101 CAGTGCTCATTCCAAACAGTGTATCTGATGGAGGGGTGACGGGTCTTAGC    150

BSNT_00912___    151 ATCGTTGGTTCACAGCTATTCAACTTGCCGCTGGGGATTTTGATTGCTGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05280___yd    151 ATCGTTGGTTCACAGCTATTCAACTTGCCGCTGGGGATTTTGATTGCTGT    200

BSNT_00912___    201 GATCAACATTCCATTTGTCTGGTTAGGATATAAGCAAATTGGGAAAAGCT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05280___yd    201 GATCAACATTCCATTTGTCTGGTTAGGATATAAGCAAATTGGGAAAAGCT    250

BSNT_00912___    251 TTGCATTATTATCAATTATCGGAATCGTATCGCTTGCCGCGGGGACAAGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05280___yd    251 TTGCATTATTATCAATTATCGGAATCGTATCGCTTGCCGCGGGGACAAGC    300

BSNT_00912___    301 TTTTTTCACCACACACCCGCTATCATAGAAGGAGATACCCTGTTAATTAC    350
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU05280___yd    301 TTTTTCCACCACACACCCGCTATCATAGAAGGAGATACCCTGTTAATTAC    350

BSNT_00912___    351 CGTTGTCGGCGGGATTATCCTTGGATTCGGAATGGGGCTGGCGCTGCGTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05280___yd    351 CGTTGTCGGCGGGATTATCCTTGGATTCGGAATGGGGCTGGCGCTGCGTA    400

BSNT_00912___    401 ATGGCGGCGCATTAGATGGAATTGACATGCTTGCTGTGCTGCTATCCCGA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05280___yd    401 ATGGCGGCGCATTAGATGGAATTGACATGCTTGCTGTGCTGCTATCCCGA    450

BSNT_00912___    451 AAACTGCCATTCGGAACGAGCGATCTCATTCTATTCTTAAACCTATTTGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05280___yd    451 AAACTGCCATTCGGAACGAGCGATCTCATTCTATTCTTAAACCTATTTGT    500

BSNT_00912___    501 GTTTATTTTTGTTTCCACAGTATTTGGCTTACAAGGGGCATTGCTTTCAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05280___yd    501 GTTTATTTTTGTTTCCACAGTATTTGGCTTACAAGGGGCATTGCTTTCAG    550

BSNT_00912___    551 TCATTGCTTACTACATTGCATCCAAAGTGATTCATGTTGTGGAGGAAGGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05280___yd    551 TCATTGCTTACTACATTGCATCCAAAGTGATTCATGTTGTGGAGGAAGGC    600

BSNT_00912___    601 TTAAGCGGCTCTAAAACCTTTCAAATTATTACAACCCAACCTGAATTAAT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05280___yd    601 TTAAGCGGCTCTAAAACCTTTCAAATTATTACAACCCAACCTGAATTAAT    650

BSNT_00912___    651 GGTAGAGACAATACGTGATCAATTAGGCCGAAGCGCCACATATAAAGAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05280___yd    651 GGTAGAGACAATACGTGATCAATTAGGCCGAAGCGCCACATATAAAGAAG    700

BSNT_00912___    701 CTTACGGGGGTTTTTCCCACGAGAAATTTAAAGAAATCACATGTGTCATC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05280___yd    701 CTTACGGGGGTTTTTCCCACGAGAAATTTAAAGAAATCACATGTGTCATC    750

BSNT_00912___    751 AATCGTTTAGAAGAAACCAAACTAAAGGAAATTATTAATGATATTGATAA    800
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU05280___yd    751 AACCGTTTAGAAGAAACCAAACTAAAGGAAATTATTAATGATATTGATAA    800

BSNT_00912___    801 ATCCGCCTTTGTCACCGTATATGACGTAGCTGAAGTGAAGGGCAGCAATT    850
                     |.|.||||||||.|||||.|||||.|||||||||||||||||||||||||
BSU05280___yd    801 AACTGCCTTTGTTACCGTGTATGATGTAGCTGAAGTGAAGGGCAGCAATT    850

BSNT_00912___    851 TTAGAAGTCTTAATCATCATTAA    873
                     ||||||.||||||||||||.|||
BSU05280___yd    851 TTAGAAATCTTAATCATCACTAA    873


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