Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00910 and BSU05260

See Amino acid alignment / Visit BSNT_00910 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:21
# Commandline: needle
#    -asequence dna-align/BSNT_00910___ydeN.1.22522.seq
#    -bsequence dna-align/BSU05260___ydeN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00910___ydeN-BSU05260___ydeN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00910___ydeN-BSU05260___ydeN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00910___ydeN
# 2: BSU05260___ydeN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 600
# Identity:     560/600 (93.3%)
# Similarity:   560/600 (93.3%)
# Gaps:          27/600 ( 4.5%)
# Score: 2748.0
# 
#
#=======================================

BSNT_00910___      1 ATGAAAATGCTTCGTGTGGAGGAAAAAATGATAAAACAAGTCTATATCAT     50
                                                ||||.||||||||||||||||||
BSU05260___yd      1 ---------------------------ATGACAAAACAAGTCTATATCAT     23

BSNT_00910___     51 TCATGGCTACGGAGCCTCCTCAACAAATCATTGGTTCCCTTGGCTGAAAA    100
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU05260___yd     24 TCATGGCTACAGAGCCTCCTCAACAAATCATTGGTTCCCTTGGCTGAAAA     73

BSNT_00910___    101 AACGCCTGCTCGCAGATGGGGTCAAAGCAGACATTTTAAACATGCCTAAT    150
                     ||||.||||||||||||||||||.||||||||||||||||||||||||||
BSU05260___yd     74 AACGTCTGCTCGCAGATGGGGTCCAAGCAGACATTTTAAACATGCCTAAT    123

BSNT_00910___    151 CCGCTACAGCCAAGACTTGAGGATTGGCTGGATACACTCTCTTTATATCA    200
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU05260___yd    124 CCGCTCCAGCCAAGACTTGAGGATTGGCTGGATACACTCTCTTTATATCA    173

BSNT_00910___    201 GCACACTTTACATGAAAATACGTATTTGGTTGCGCACAGCTTAGGGTGCC    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU05260___yd    174 GCACACTTTACATGAAAATACGTATTTGGTTGCGCACAGCTTAGGTTGCC    223

BSNT_00910___    251 CCGCCATTTTGAGATTTTTGGAACATCTTCAATTACGAAAACAGCTTGGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05260___yd    224 CCGCCATTTTGAGATTTTTGGAACATCTTCAATTACGAAAACAGCTTGGC    273

BSNT_00910___    301 GGAATCATACTTGTTTCCGGCTTTGCCAAATCATTGCCCACTTTAAAGAT    350
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU05260___yd    274 GGAATCATACTTGTTTCCGGCTTTGCCAAATCATTGCCCACTTTACAGAT    323

BSNT_00910___    351 GTTAGATGAATTTACACAGCGATCGTTTGATCATCAAACAATCATTGAGT    400
                     |||||||||||||||||||.||||||||||||||||||.||||||.||||
BSU05260___yd    324 GTTAGATGAATTTACACAGGGATCGTTTGATCATCAAAAAATCATCGAGT    373

BSNT_00910___    401 CCGCGAAGCACCGTGCTGTTATTGCTTCTAAGGACGACCAAATTGTGCCT    450
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU05260___yd    374 CCGCGAAGCACCGTGCTGTCATTGCTTCTAAGGACGACCAAATTGTGCCT    423

BSNT_00910___    451 TTTTCATTCAGCAAGGATCTGGCACAACAAATTGACGCTGCGTTATATGA    500
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU05260___yd    424 TTTTCATTCAGCAAGGATCTGGCACAACAAATTGATGCTGCGTTATATGA    473

BSNT_00910___    501 AGTTCAGCACGGAGGTCATTTTCTAGAAGATGAGGGATTTACTTCTTTGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05260___yd    474 AGTTCAGCACGGAGGTCATTTTCTAGAAGATGAGGGATTTACTTCTTTGC    523

BSNT_00910___    551 CTATTGTTTATGATGTTTTAACCTCTTATTTTTCAAAGGAAACTCGCTAA    600
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU05260___yd    524 CTATTGTTTATGATGTTTTAACCTCTTATTTTTCAAAGGAAACCCGCTAA    573


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00910 and BSU05260

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
