Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00909 and BSU05250

See Amino acid alignment / Visit BSNT_00909 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:21
# Commandline: needle
#    -asequence dna-align/BSNT_00909___ydeM.1.22522.seq
#    -bsequence dna-align/BSU05250___ydeM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00909___ydeM-BSU05250___ydeM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00909___ydeM-BSU05250___ydeM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00909___ydeM
# 2: BSU05250___ydeM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 426
# Identity:     421/426 (98.8%)
# Similarity:   421/426 (98.8%)
# Gaps:           0/426 ( 0.0%)
# Score: 2085.0
# 
#
#=======================================

BSNT_00909___      1 GTGAAGTTAGATGAGTTTACAATTGGCCAGGTCTTCAAAACGAAATCATT     50
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU05250___yd      1 ATGAAGTTAGATGAGTTTACAATTGGCCAGGTCTTCAAAACGAAATCATT     50

BSNT_00909___     51 AAAAGTATCCAAAGATGATATTATGCGGTTTGCGGGTGAATTTGACCCCC    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||.|
BSU05250___yd     51 AAAAGTATCAAAAGATGATATTATGCGGTTTGCGGGTGAATTTGACCCTC    100

BSNT_00909___    101 AGTATATGCATGTAGATGAAGAAAAAGCGAGTAAAGGCAGATTTAATGGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05250___yd    101 AGTATATGCATGTAGATGAAGAAAAAGCGAGTAAAGGCAGATTTAATGGA    150

BSNT_00909___    151 ATTATCGCTTCCGGCATACAAACACTGGCCATATCTTTTAAACTTTGGAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05250___yd    151 ATTATCGCTTCCGGCATACAAACACTGGCCATATCTTTTAAACTTTGGAT    200

BSNT_00909___    201 TGAAGAAGGTTTCTATGGAGACGATATTATAGCCGGAACAGAGATGAATC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05250___yd    201 TGAAGAAGGTTTCTATGGAGACGATATTATAGCCGGAACAGAGATGAATC    250

BSNT_00909___    251 ATATGATATTCATAAAACCCGTATATCCGGATGATGAATTGTTTACAATT    300
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU05250___yd    251 ATATGACATTCATAAAACCCGTATATCCGGATGATGAATTGTTTACAATT    300

BSNT_00909___    301 GTTAAGGTTCTTGATAAGCAGCCAAAGAGAAATGAATTGGGAATACTCAC    350
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU05250___yd    301 GTTGAGGTTCTTGATAAGCAGCCAAAGAGAAATGAATTGGGAATACTCAC    350

BSNT_00909___    351 AGTATTGCTATCTACTTATAATCAAAAAGAAGTAAAAGTGTTTGAAGGTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05250___yd    351 AGTATTGCTATCTACTTATAATCAAAAAGAAGTAAAAGTGTTTGAAGGTG    400

BSNT_00909___    401 AGTTATCTGTATTGATCAAACGATAA    426
                     ||||||||||||||||||||||||||
BSU05250___yd    401 AGTTATCTGTATTGATCAAACGATAA    426


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