Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00908 and BSU05240
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:20
# Commandline: needle
# -asequence dna-align/BSNT_00908___ydeL.1.22522.seq
# -bsequence dna-align/BSU05240___ydeL.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00908___ydeL-BSU05240___ydeL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00908___ydeL-BSU05240___ydeL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00908___ydeL
# 2: BSU05240___ydeL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1398
# Identity: 1368/1398 (97.9%)
# Similarity: 1368/1398 (97.9%)
# Gaps: 6/1398 ( 0.4%)
# Score: 6744.0
#
#
#=======================================
BSNT_00908___ 1 GTGCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATAGTCCGCT 50
||||||||||||||||||||||||||||.||||||||.||||||
BSU05240___yd 1 ------ATGGATATCACGCCTTTTTTGAATAGAACTCTGGATATTCCGCT 44
BSNT_00908___ 51 TTATCAGCAGCTTTATCGGTATTTTAAAGAAAACATGCATCGGGGCCGTA 100
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU05240___yd 45 TTATCAGCAGCTTTATCGGTATTTTAAAGAAAATATGCATCGGGGCCGTA 94
BSNT_00908___ 101 TTCAAAAAGGAATGAAGCTTCCTTCAAAAAGACTCTTGGCGAATCAGCTT 150
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU05240___yd 95 TTCAAAAAGGAATGAAGCTTCCTTCAAAAAGACTCCTGGCGAATCAGCTT 144
BSNT_00908___ 151 TCCATCAGCCAAACGACTGTAGAACGTGCCTATGAACAGCTCGCTGCTGA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 145 TCCATCAGCCAAACGACTGTAGAACGTGCCTATGAACAGCTCGCTGCTGA 194
BSNT_00908___ 201 GGGCTATATTGTGAGCAAGCCAAGAAGCGGGTGGTTTGCTGATTATCATG 250
.||.||||||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 195 AGGTTATATTGTGAGCAAGCCAAGAAGCGGGTGGTTTGCTGATTATCATG 244
BSNT_00908___ 251 ATTCTGATTTTGCTAATGATAGAATGCCAAGCACAACACCCATTCAACAA 300
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU05240___yd 245 ATTCTGATTTTGCTTATGATAGAATGCCAAGCACAACACCCATTCAACAA 294
BSNT_00908___ 301 GAAGCAGAAGAAAATAAACAATGGATTGATTTTCATTATGGGAATGTAGA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 295 GAAGCAGAAGAAAATAAACAATGGATTGATTTTCATTATGGGAATGTAGA 344
BSNT_00908___ 351 TTCTTCTTACTTCCCTTTTTCCGCATGGCGAAAAAGCATGGTCAATAGCT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 345 TTCTTCTTACTTCCCTTTTTCCGCATGGCGAAAAAGCATGGTCAATAGCT 394
BSNT_00908___ 401 TAGACCAATATGGACACGAGCTTTATCGGCCAGGACATGTTTTAGGAGAG 450
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU05240___yd 395 TAGACCAATATGGACACGAGCTTTATCGGCCGGGACATGTTTTAGGAGAG 444
BSNT_00908___ 451 TTTGAGCTGAGAACACTCATTGCAGAGTACCTGTATCAATCTCGGGGTGT 500
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU05240___yd 445 TTTGAGCTGAGAACACTCATTGCAGAGTACCTGTATCAATCTCGGGGGGT 494
BSNT_00908___ 501 TCATTGCGGCCCTGAACAAGTGATTATAGGTGCCGGGAACCCTATTCTGC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 495 TCATTGCGGCCCTGAACAAGTGATTATAGGTGCCGGGAACCCTATTCTGC 544
BSNT_00908___ 551 TGCAAATCTTGTGCCAAGTTTTTGAGCCGAATATTTCTATAGGGTATGAG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 545 TGCAAATCTTGTGCCAAGTTTTTGAGCCGAATATTTCTATAGGGTATGAG 594
BSNT_00908___ 601 GATCCTGGTTATCCAAGAGCACGCAAAATTTTTGAAGCCAATCGCATGAA 650
||||||||||||||||||||||||||.||||||||||||||.||||||||
BSU05240___yd 595 GATCCTGGTTATCCAAGAGCACGCAAGATTTTTGAAGCCAACCGCATGAA 644
BSNT_00908___ 651 TATTGTTCCGATACCAGTCGATGAGGAAGGAATCTGTATACAGAAGGTCA 700
|||||||||.||||||||||||||.||.||||||||||||||||||.|||
BSU05240___yd 645 TATTGTTCCTATACCAGTCGATGATGAGGGAATCTGTATACAGAAGATCA 694
BSNT_00908___ 701 AAGAACAGCAGCCAAACCTTGTATATGTCACACCTTCCCATCAATTTACG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 695 AAGAACAGCAGCCAAACCTTGTATATGTCACACCTTCCCATCAATTTACG 744
BSNT_00908___ 751 CTGGGAACCATAATGACAATAAACAGAAGAATTCAGCTGCTCAAATGGGC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 745 CTGGGAACCATAATGACAATAAACAGAAGAATTCAGCTGCTCAAATGGGC 794
BSNT_00908___ 801 AGCCGAAAATCAATCCTTTATCATAGAGGATGATTATGACGGGGAATTTA 850
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 795 GGCCGAAAATCAATCCTTTATCATAGAGGATGATTATGACGGGGAATTTA 844
BSNT_00908___ 851 GGTACACAGGACAGCCGGTTCCTTCTCTGCAAGGGCTTGATCAGCATAAC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 845 GGTACACAGGACAGCCGGTTCCTTCTCTGCAAGGGCTTGATCAGCATAAC 894
BSNT_00908___ 901 CGTGTCATTTATATGGGCACTTTTTCTAAGTCTCTTTTGCCCTCGCTGCG 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 895 CGTGTCATTTATATGGGCACTTTTTCTAAGTCTCTTTTGCCCTCGCTGCG 944
BSNT_00908___ 951 TATCAGCTATATGATTCTTCCTTCACCTCTTTTAAAAAAGGGGCATGACA 1000
||||||||||||||||||||||||.|||||||||||||||||.|||||.|
BSU05240___yd 945 TATCAGCTATATGATTCTTCCTTCGCCTCTTTTAAAAAAGGGTCATGAAA 994
BSNT_00908___ 1001 TCACGTCATTATATAAGCAGACAGTGTCCTGCCACAGTCAGCTAACCCTA 1050
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 995 TCACGTCCTTATATAAGCAGACAGTGTCCTGCCACAGTCAGCTAACCCTA 1044
BSNT_00908___ 1051 GCTGAATTTATAAAAAATGGAGAGTGGCAAAAACACATCAACAGAATGAG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 1045 GCTGAATTTATAAAAAATGGAGAGTGGCAAAAACACATCAACAGAATGAG 1094
BSNT_00908___ 1101 AAAGCTTTACCGCAAAAAAAGAGCCATTGTATTAGAGGCAGTGCAAAGGG 1150
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 1095 AAAACTTTACCGCAAAAAAAGAGCCATTGTATTAGAGGCAGTGCAAAGGG 1144
BSNT_00908___ 1151 AATTAGGAGAGCATGTCAGAATTCGCGGAGAAAACTCTGGGCTTCGTATC 1200
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU05240___yd 1145 AATTAGGAGAGCATGTCAGAATCCGCGGAGAAAACTCTGGGCTTCGTATC 1194
BSNT_00908___ 1201 TTACTTGACGTTTATTTGCCATTTGGTGAAAAAGAGTTAATTGAGAAGGC 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 1195 TTACTTGACGTTTATTTGCCATTTGGTGAAAAAGAGTTAATTGAGAAGGC 1244
BSNT_00908___ 1251 GAAAAAACATGGAGTGAAAATTTATCCTGTTTCTCTTTCTTATCAACATC 1300
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU05240___yd 1245 GAAAAAACATGGAGTAAAAATTTATCCTGTTTCTCTTTCTTATCAACATC 1294
BSNT_00908___ 1301 ATCCTCCCACAAAAACGGTCTCGCTCGGGTTTGCAGGGGTTTCTGAATCC 1350
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 1295 ATCCTCCTACAAAAACGGTCTCGCTCGGGTTTGCAGGGGTTTCTGAATCC 1344
BSNT_00908___ 1351 GACATAAGAGAAGGCATAAAAAAACTGAAGGCTGCCTGGAAGATATGA 1398
||||||||||||||||||||||||||||||||||||||||||||||||
BSU05240___yd 1345 GACATAAGAGAAGGCATAAAAAAACTGAAGGCTGCCTGGAAGATATGA 1392
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