Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00896 and BSU05200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:20
# Commandline: needle
# -asequence dna-align/BSNT_00896.1.22522.seq
# -bsequence dna-align/BSU05200___ydeH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00896-BSU05200___ydeH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00896-BSU05200___ydeH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00896
# 2: BSU05200___ydeH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity: 369/447 (82.6%)
# Similarity: 369/447 (82.6%)
# Gaps: 72/447 (16.1%)
# Score: 1821.0
#
#
#=======================================
BSNT_00896 0 -------------------------------------------------- 0
BSU05200___yd 1 TTGAATCACATAAAATGGTTATCGGATTTGAAAAAGGCAGGATTACTCGC 50
BSNT_00896 1 ----------------------TTGTTAAAAAGGTTTTCTCTTGTTTTTG 28
||||||||||||||||||||||||.|||
BSU05200___yd 51 TTTAGGTAAAGGAGTCATAACGTTGTTAAAAAGGTTTTCTCTTGTTATTG 100
BSNT_00896 29 TTACACTAATGATGTCTATACTTGTTGTTTTAGCGGCCGCTAAAGAGTCG 78
|||||||||||||||||||..||||||||||||||||.||||||||||||
BSU05200___yd 101 TTACACTAATGATGTCTATCGTTGTTGTTTTAGCGGCTGCTAAAGAGTCG 150
BSNT_00896 79 CCTGGAGATCATGTCATCTCATTTGATGAACCTCTTATCTTGATGATCTC 128
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU05200___yd 151 CCTGGAGATCATGTCATCTCATTTGATGAACCTATTATCTTGATGATCTC 200
BSNT_00896 129 AATTGGAATCGTTGTATTTTTATTTATCCCTCCATTAGTCATGTCCTTTT 178
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU05200___yd 201 AATTGGAATCGTTGTATTTTTATTGATCCCTCCATTAGTCATGTCCTTTT 250
BSNT_00896 179 TTGGCAATTTGGTTGTAAGAATAATATCTGGTGTATACCAATGTTTTATC 228
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05200___yd 251 TTGGCAATTTGGTTGTAAGAATAATATCTGGTGTATACCAATGTTTTATC 300
BSNT_00896 229 GTTTTCACTTTTCTGGGGCTCATTCCAATTGGATTTCTTATTCCCAATGG 278
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05200___yd 301 GTTTTCACTTTTCTGGGGCTCATTCCAATTGGATTTCTTATTCCCAATGG 350
BSNT_00896 279 CTTTTTGACAATTCTAGTTTCTATTGCAGGAACTTTAGTCAGTATAGCTA 328
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05200___yd 351 CTTTTTGACAATTCTAGTTTCTATTGCAGGAACTTTAGTCAGTATAGCTA 400
BSNT_00896 329 GTGTTGCCGTAACCTTATGCATTGGCAAGAATAAAAAAGATATATAA 375
|||||||||||||||||||||||||||||||||||||||||||||||
BSU05200___yd 401 GTGTTGCCGTAACCTTATGCATTGGCAAGAATAAAAAAGATATATAA 447
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