Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00893 and BSU05180

See Amino acid alignment / Visit BSNT_00893 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:19
# Commandline: needle
#    -asequence dna-align/BSNT_00893___ydeF.1.22522.seq
#    -bsequence dna-align/BSU05180___ydeF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00893___ydeF-BSU05180___ydeF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00893___ydeF-BSU05180___ydeF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00893___ydeF
# 2: BSU05180___ydeF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1398
# Identity:    1367/1398 (97.8%)
# Similarity:  1367/1398 (97.8%)
# Gaps:           9/1398 ( 0.6%)
# Score: 6747.0
# 
#
#=======================================

BSNT_00893___      1 ---------ATGCCTATCAATTCTTTTGAAAACTATCCGATGAGCTGGAA     41
                              |||||||||||||||||||||||.|||||||||||||||||
BSU05180___yd      1 ATGCGTATCATGCCTATCAATTCTTTTGAAAATTATCCGATGAGCTGGAA     50

BSNT_00893___     42 GCCATCGATTGATAAAGCTGAAAAGCCTATTTATAAAGCACTTGCAGGGC     91
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd     51 GCCATCGATTGATAAAGCTGAAAAGCCTATTTATAAAGCACTTGCAGGGC    100

BSNT_00893___     92 AATTGGAACAGGATATTTTAAACGGAGTTTTATTACCTGGAACAAAACTT    141
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd    101 AATTGGAACAGGATATTTTAAACGGAGTTTTATTACCTGGAACAAAACTT    150

BSNT_00893___    142 CCTCCGCAGCGAGAATTGGCTGATTATTTAGATTTAAATGTGAGTACGAT    191
                     |||||.||||||||||||||.||||||.||||||||||||||||||||||
BSU05180___yd    151 CCTCCACAGCGAGAATTGGCCGATTATCTAGATTTAAATGTGAGTACGAT    200

BSNT_00893___    192 TTCCAAAGCATTTAAAGTGTGTGAGTTAAAGGGGCTGCTGAGTGCGACTG    241
                     |||.||||||||||||||||||||||||||.|||||||||||||||||||
BSU05180___yd    201 TTCAAAAGCATTTAAAGTGTGTGAGTTAAAAGGGCTGCTGAGTGCGACTG    250

BSNT_00893___    242 TAGGGAGCGGCACATTTGTATCGTATGATGCGTTGTTGAATGCGTATTTA    291
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU05180___yd    251 TAGGGAGCGGCACATTTGTATCGTATGATGCGTTGTCGAATGCGTATTTA    300

BSNT_00893___    292 CTTGAGGATACAAAGCCGACACATTTAATTGAAATGGGAGCAATACTTCC    341
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU05180___yd    301 CTTGAGGATACTAAGCCGACACATTTAATTGAAATGGGAGCAATACTTCC    350

BSNT_00893___    342 AGATCACGCTTCATATGAGCCCTTGTTACACCAACTGAAAAACATGATTC    391
                     ||||||||||||||||||||||||||||.|||||||||||||||||.|||
BSU05180___yd    351 AGATCACGCTTCATATGAGCCCTTGTTATACCAACTGAAAAACATGGTTC    400

BSNT_00893___    392 AGGAGGAGGATTATGAAAAATGGTTTAGCTACGGCCGGGCAGGCGAAAGC    441
                     |.|||||||||||||||||||||||||||||.|||||||||||.||||||
BSU05180___yd    401 ATGAGGAGGATTATGAAAAATGGTTTAGCTATGGCCGGGCAGGTGAAAGC    450

BSNT_00893___    442 CTTTGGCAAAAAGATGCAGCTGTAAAGCTCATCCAAAGAGGCGGATTTGA    491
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd    451 CTTTGGCAAAAAGATGCAGCTGTAAAGCTCATCCAAAGAGGCGGATTTGA    500

BSNT_00893___    492 AACATCCGTTGATCACATTTTATTTGCAAATGGAGGGCAAAATGCGATTG    541
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd    501 AACATCCGTTGATCACATTTTATTTGCAAATGGAGGGCAAAATGCGATTG    550

BSNT_00893___    542 CTGCGACATTGGCGAGTCTTTGTAAGCCTGGAGATCGCATCGGTGTTGAC    591
                     |.|||||||||||||||||||||||||||||||||||||||||.||||||
BSU05180___yd    551 CAGCGACATTGGCGAGTCTTTGTAAGCCTGGAGATCGCATCGGAGTTGAC    600

BSNT_00893___    592 CATCATACGTACCCTGGATTAAAAACTGTTGCATCATTGCTTAGTGTGCA    641
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd    601 CATCATACGTACCCTGGATTAAAAACTGTTGCATCATTGCTTAGTGTGCA    650

BSNT_00893___    642 AATCGTACCGATAAAATCAGAAAACGATGAAATGAGTCCGGAGTCACTTG    691
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd    651 AATCGTACCGATAAAATCAGAAAACGATGAAATGAGTCCGGAGTCACTTG    700

BSNT_00893___    692 AATATGCGTGTAAAAACGAAAATATTAAAGGTTTGTATTTAATCCCGGAT    741
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd    701 AATATGCGTGTAAAAACGAAAATATTAAAGGTTTGTATTTAATCCCGGAT    750

BSNT_00893___    742 TATCATAATCCGACGACTTCCTTTATGTCTGTTGAGAATCGAAGAATGGT    791
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd    751 TATCATAATCCGACGACTTCCTTTATGTCTGTTGAGAATCGAAGAATGGT    800

BSNT_00893___    792 TGCAGACATTGCAAAGAAATATAATCTATTTGTTATTGAGGATGCATCGT    841
                     |||||||||||.|||||||||||||||.||||||||||||||||||||||
BSU05180___yd    801 TGCAGACATTGTAAAGAAATATAATCTGTTTGTTATTGAGGATGCATCGT    850

BSNT_00893___    842 ACCATCTTCTCAACAAAAATCCGCTTCCGGCACTCGCCTCATTCGCACCG    891
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd    851 ACCATCTTCTCAACAAAAATCCGCTTCCGGCACTCGCCTCATTCGCACCG    900

BSNT_00893___    892 CAACAGGTTATTCATATTGCAAGTTTATCAAAATCGTTAGCGCCAGGCCT    941
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd    901 CAACAGGTTATTCATATTGCAAGTTTATCAAAATCGTTAGCGCCAGGCCT    950

BSNT_00893___    942 GCGTTTGGCTTATGTAGCAGTGCCGAGACAATATAAGGAGCTAATATCAA    991
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU05180___yd    951 GCGTTTGGCTTATGTAGCAGTGCCGAGACAATATAAGGAGCCAATATCAA   1000

BSNT_00893___    992 AGGCGCTTTATAATTTAAATATAACCGTTTCCCCGCTATTAGCTGAACTT   1041
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU05180___yd   1001 AGGCGCTTTATAATTTAAATATAACTGTTTCCCCGCTATTAGCTGAACTT   1050

BSNT_00893___   1042 ACTGCTCGCACGATTGTATCAAATCAATTTGAAGTCTTAATTGAGAGTCA   1091
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd   1051 ACTGCTCGCACGATTGTATCAAATCAATTTGAAGTCTTAATTGAGAGTCA   1100

BSNT_00893___   1092 TCGTGAACAAACCATTCGCAGAAATCAACTCGTAAACCGATATGTTGCGG   1141
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd   1101 TCGTGAACAAACCATTCGCAGAAATCAACTCGTAAACCGATATGTTGCGG   1150

BSNT_00893___   1142 GATATACATGTTTAGGTGTTGAAACAGGCATTTTTCGTTGGTTGTTGTTA   1191
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd   1151 GATATACATGTTTAGGTGTTGAAACAGGCATTTTTCGTTGGTTGTTGTTA   1200

BSNT_00893___   1192 CCGGGTAAAATGTCTGGTGCCGAATTTGAAGAATTGGCTGCTCAACATGG   1241
                     |||||||||||||||||||||||||||||||||||||||||||.||.|||
BSU05180___yd   1201 CCGGGTAAAATGTCTGGTGCCGAATTTGAAGAATTGGCTGCTCGACTTGG   1250

BSNT_00893___   1242 CGTGCAAGTGTATGCGGCTGAACGCTTTGTAGTGGGAAATAGTTGTCCTG   1291
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd   1251 CGTGCAAGTGTATGCGGCTGAACGCTTTGTAGTGGGAAATAGTTGTCCTG   1300

BSNT_00893___   1292 AAAGGGCTGTAAGGGTTTCTGCCTGTGCACCAAAAACACTTGAAGAGCTT   1341
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU05180___yd   1301 AAAGGGCTGTAAGGGTTTCTGTCTGTGCACCAAAAACACTTGAAGAGCTT   1350

BSNT_00893___   1342 GAACAAGGATTAATGATCCTGAGACGTTTGCTAGACGATCTTACCTAA   1389
                     ||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd   1351 GAACAAGGATTAATGATCCTGAGACGTTTGCTAGACGATCTTACCTAA   1398


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