Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00893 and BSU05180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:19
# Commandline: needle
# -asequence dna-align/BSNT_00893___ydeF.1.22522.seq
# -bsequence dna-align/BSU05180___ydeF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00893___ydeF-BSU05180___ydeF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00893___ydeF-BSU05180___ydeF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00893___ydeF
# 2: BSU05180___ydeF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1398
# Identity: 1367/1398 (97.8%)
# Similarity: 1367/1398 (97.8%)
# Gaps: 9/1398 ( 0.6%)
# Score: 6747.0
#
#
#=======================================
BSNT_00893___ 1 ---------ATGCCTATCAATTCTTTTGAAAACTATCCGATGAGCTGGAA 41
|||||||||||||||||||||||.|||||||||||||||||
BSU05180___yd 1 ATGCGTATCATGCCTATCAATTCTTTTGAAAATTATCCGATGAGCTGGAA 50
BSNT_00893___ 42 GCCATCGATTGATAAAGCTGAAAAGCCTATTTATAAAGCACTTGCAGGGC 91
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd 51 GCCATCGATTGATAAAGCTGAAAAGCCTATTTATAAAGCACTTGCAGGGC 100
BSNT_00893___ 92 AATTGGAACAGGATATTTTAAACGGAGTTTTATTACCTGGAACAAAACTT 141
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd 101 AATTGGAACAGGATATTTTAAACGGAGTTTTATTACCTGGAACAAAACTT 150
BSNT_00893___ 142 CCTCCGCAGCGAGAATTGGCTGATTATTTAGATTTAAATGTGAGTACGAT 191
|||||.||||||||||||||.||||||.||||||||||||||||||||||
BSU05180___yd 151 CCTCCACAGCGAGAATTGGCCGATTATCTAGATTTAAATGTGAGTACGAT 200
BSNT_00893___ 192 TTCCAAAGCATTTAAAGTGTGTGAGTTAAAGGGGCTGCTGAGTGCGACTG 241
|||.||||||||||||||||||||||||||.|||||||||||||||||||
BSU05180___yd 201 TTCAAAAGCATTTAAAGTGTGTGAGTTAAAAGGGCTGCTGAGTGCGACTG 250
BSNT_00893___ 242 TAGGGAGCGGCACATTTGTATCGTATGATGCGTTGTTGAATGCGTATTTA 291
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU05180___yd 251 TAGGGAGCGGCACATTTGTATCGTATGATGCGTTGTCGAATGCGTATTTA 300
BSNT_00893___ 292 CTTGAGGATACAAAGCCGACACATTTAATTGAAATGGGAGCAATACTTCC 341
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU05180___yd 301 CTTGAGGATACTAAGCCGACACATTTAATTGAAATGGGAGCAATACTTCC 350
BSNT_00893___ 342 AGATCACGCTTCATATGAGCCCTTGTTACACCAACTGAAAAACATGATTC 391
||||||||||||||||||||||||||||.|||||||||||||||||.|||
BSU05180___yd 351 AGATCACGCTTCATATGAGCCCTTGTTATACCAACTGAAAAACATGGTTC 400
BSNT_00893___ 392 AGGAGGAGGATTATGAAAAATGGTTTAGCTACGGCCGGGCAGGCGAAAGC 441
|.|||||||||||||||||||||||||||||.|||||||||||.||||||
BSU05180___yd 401 ATGAGGAGGATTATGAAAAATGGTTTAGCTATGGCCGGGCAGGTGAAAGC 450
BSNT_00893___ 442 CTTTGGCAAAAAGATGCAGCTGTAAAGCTCATCCAAAGAGGCGGATTTGA 491
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd 451 CTTTGGCAAAAAGATGCAGCTGTAAAGCTCATCCAAAGAGGCGGATTTGA 500
BSNT_00893___ 492 AACATCCGTTGATCACATTTTATTTGCAAATGGAGGGCAAAATGCGATTG 541
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd 501 AACATCCGTTGATCACATTTTATTTGCAAATGGAGGGCAAAATGCGATTG 550
BSNT_00893___ 542 CTGCGACATTGGCGAGTCTTTGTAAGCCTGGAGATCGCATCGGTGTTGAC 591
|.|||||||||||||||||||||||||||||||||||||||||.||||||
BSU05180___yd 551 CAGCGACATTGGCGAGTCTTTGTAAGCCTGGAGATCGCATCGGAGTTGAC 600
BSNT_00893___ 592 CATCATACGTACCCTGGATTAAAAACTGTTGCATCATTGCTTAGTGTGCA 641
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd 601 CATCATACGTACCCTGGATTAAAAACTGTTGCATCATTGCTTAGTGTGCA 650
BSNT_00893___ 642 AATCGTACCGATAAAATCAGAAAACGATGAAATGAGTCCGGAGTCACTTG 691
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd 651 AATCGTACCGATAAAATCAGAAAACGATGAAATGAGTCCGGAGTCACTTG 700
BSNT_00893___ 692 AATATGCGTGTAAAAACGAAAATATTAAAGGTTTGTATTTAATCCCGGAT 741
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd 701 AATATGCGTGTAAAAACGAAAATATTAAAGGTTTGTATTTAATCCCGGAT 750
BSNT_00893___ 742 TATCATAATCCGACGACTTCCTTTATGTCTGTTGAGAATCGAAGAATGGT 791
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd 751 TATCATAATCCGACGACTTCCTTTATGTCTGTTGAGAATCGAAGAATGGT 800
BSNT_00893___ 792 TGCAGACATTGCAAAGAAATATAATCTATTTGTTATTGAGGATGCATCGT 841
|||||||||||.|||||||||||||||.||||||||||||||||||||||
BSU05180___yd 801 TGCAGACATTGTAAAGAAATATAATCTGTTTGTTATTGAGGATGCATCGT 850
BSNT_00893___ 842 ACCATCTTCTCAACAAAAATCCGCTTCCGGCACTCGCCTCATTCGCACCG 891
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd 851 ACCATCTTCTCAACAAAAATCCGCTTCCGGCACTCGCCTCATTCGCACCG 900
BSNT_00893___ 892 CAACAGGTTATTCATATTGCAAGTTTATCAAAATCGTTAGCGCCAGGCCT 941
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd 901 CAACAGGTTATTCATATTGCAAGTTTATCAAAATCGTTAGCGCCAGGCCT 950
BSNT_00893___ 942 GCGTTTGGCTTATGTAGCAGTGCCGAGACAATATAAGGAGCTAATATCAA 991
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU05180___yd 951 GCGTTTGGCTTATGTAGCAGTGCCGAGACAATATAAGGAGCCAATATCAA 1000
BSNT_00893___ 992 AGGCGCTTTATAATTTAAATATAACCGTTTCCCCGCTATTAGCTGAACTT 1041
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU05180___yd 1001 AGGCGCTTTATAATTTAAATATAACTGTTTCCCCGCTATTAGCTGAACTT 1050
BSNT_00893___ 1042 ACTGCTCGCACGATTGTATCAAATCAATTTGAAGTCTTAATTGAGAGTCA 1091
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd 1051 ACTGCTCGCACGATTGTATCAAATCAATTTGAAGTCTTAATTGAGAGTCA 1100
BSNT_00893___ 1092 TCGTGAACAAACCATTCGCAGAAATCAACTCGTAAACCGATATGTTGCGG 1141
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd 1101 TCGTGAACAAACCATTCGCAGAAATCAACTCGTAAACCGATATGTTGCGG 1150
BSNT_00893___ 1142 GATATACATGTTTAGGTGTTGAAACAGGCATTTTTCGTTGGTTGTTGTTA 1191
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd 1151 GATATACATGTTTAGGTGTTGAAACAGGCATTTTTCGTTGGTTGTTGTTA 1200
BSNT_00893___ 1192 CCGGGTAAAATGTCTGGTGCCGAATTTGAAGAATTGGCTGCTCAACATGG 1241
|||||||||||||||||||||||||||||||||||||||||||.||.|||
BSU05180___yd 1201 CCGGGTAAAATGTCTGGTGCCGAATTTGAAGAATTGGCTGCTCGACTTGG 1250
BSNT_00893___ 1242 CGTGCAAGTGTATGCGGCTGAACGCTTTGTAGTGGGAAATAGTTGTCCTG 1291
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd 1251 CGTGCAAGTGTATGCGGCTGAACGCTTTGTAGTGGGAAATAGTTGTCCTG 1300
BSNT_00893___ 1292 AAAGGGCTGTAAGGGTTTCTGCCTGTGCACCAAAAACACTTGAAGAGCTT 1341
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU05180___yd 1301 AAAGGGCTGTAAGGGTTTCTGTCTGTGCACCAAAAACACTTGAAGAGCTT 1350
BSNT_00893___ 1342 GAACAAGGATTAATGATCCTGAGACGTTTGCTAGACGATCTTACCTAA 1389
||||||||||||||||||||||||||||||||||||||||||||||||
BSU05180___yd 1351 GAACAAGGATTAATGATCCTGAGACGTTTGCTAGACGATCTTACCTAA 1398
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