Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00892 and BSU05170

See Amino acid alignment / Visit BSNT_00892 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:19
# Commandline: needle
#    -asequence dna-align/BSNT_00892___ydeE.1.22522.seq
#    -bsequence dna-align/BSU05170___ydeE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00892___ydeE-BSU05170___ydeE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00892___ydeE-BSU05170___ydeE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00892___ydeE
# 2: BSU05170___ydeE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 885
# Identity:     854/885 (96.5%)
# Similarity:   854/885 (96.5%)
# Gaps:          12/885 ( 1.4%)
# Score: 4194.0
# 
#
#=======================================

BSNT_00892___      1 ATGGATTTGCTTAAAAGTATGAATAGGGCGTTAAAGTATATTGAAGAAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05170___yd      1 ATGGATTTGCTTAAAAGTATGAATAGGGCGTTAAAGTATATTGAAGAAAA     50

BSNT_00892___     51 CCTCACTAACGATATTGATTTTCAAGAGGCAGCAAAGCTTGCTTTCTGCT    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU05170___yd     51 CCTCACTAATGATATTGATTTTCAAGAGGCAGCAAAGCTTGCTTTCTGCT    100

BSNT_00892___    101 CTGAATATCATTTTAAAAGGATGTTTTCCTTCCTTGCAGGTATTTCATTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05170___yd    101 CTGAATATCATTTTAAAAGGATGTTTTCCTTCCTTGCAGGTATTTCATTA    150

BSNT_00892___    151 TCGGAATATATTCGTCGCAGACGTCTTACTCTTGCAGCTTTTGAACTGAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05170___yd    151 TCGGAATATATTCGTCGCAGACGTCTTACTCTTGCAGCTTTTGAACTGAA    200

BSNT_00892___    201 AGACAGCAATGTAAAAGTGATTGATATTGCAATAAAGTACGGTTATAACT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05170___yd    201 AGACAGCAATGTAAAAGTGATTGATATTGCAATAAAGTACGGTTATAACT    250

BSNT_00892___    251 CACCTGATTCTTTTGCACGGGCATTCCAAAATTTACATGGCATAAACCCA    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU05170___yd    251 CACCAGATTCTTTTGCACGGGCATTCCAAAATTTACATGGCATAAACCCA    300

BSNT_00892___    301 TCAAAAGCCAGACTTAATGGCCATTCCCTTAAAGCTTATCCACGAATGAC    350
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU05170___yd    301 TCAAAAGCCAGATTTAATGGCCATTCCCTTAAAGCTTATCCACGAATGAC    350

BSNT_00892___    351 CTTCCAGCTAACAATTAAAGGAGGAAATGAAATGAACTACCGTATTGAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05170___yd    351 CTTCCAGCTAACAATTAAAGGAGGAAATGAAATGAACTACCGTATTGAAG    400

BSNT_00892___    401 AAAAAGAGGCATTTCGCATCGTTGGCATTAAAAAAAGAGTTCCTATTATT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05170___yd    401 AAAAAGAGGCATTTCGCATCGTTGGCATTAAAAAAAGAGTTCCTATTATT    450

BSNT_00892___    451 TTTAAAGGGATTAATCCGGAGATTGCATCTATGTGGGAAAGTTTAGATGA    500
                     ||.|||||.|||||||||||.|||||||||||||||||||||||||||||
BSU05170___yd    451 TTCAAAGGAATTAATCCGGAAATTGCATCTATGTGGGAAAGTTTAGATGA    500

BSNT_00892___    501 AAAAGCAATAAATAAACTAAAAGAGCTTTCTAATGTAGCACCATCAGGAC    550
                     |||||||||||||||||||||||||||.||||||||||||||||||||.|
BSU05170___yd    501 AAAAGCAATAAATAAACTAAAAGAGCTATCTAATGTAGCACCATCAGGCC    550

BSNT_00892___    551 TCATTAGTGCATCCACCAATTTTTCTGAAGGTCGGACTGAGGAAAAAGGA    600
                     ||||||||||||||||.||||||||||||||||||||.||||||||.|||
BSU05170___yd    551 TCATTAGTGCATCCACGAATTTTTCTGAAGGTCGGACAGAGGAAAACGGA    600

BSNT_00892___    601 GAGCTCGATCACTATATTGGCGCAGCCACAACGAAACAGTGTCCAGATAA    650
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU05170___yd    601 GAGCTCGATCACTATATTGGCGCAGCCACAACGAAACGGTGTCCAGATAA    650

BSNT_00892___    651 TTTCTCACGGCTTGAAGTTCCTGCCTTAACGTGGGCTGTATTCGAATCAA    700
                     .|||||||||||||||||||||||||.|||.|||||||||||||||||||
BSU05170___yd    651 CTTCTCACGGCTTGAAGTTCCTGCCTCAACATGGGCTGTATTCGAATCAA    700

BSNT_00892___    701 TCGGACCATTTCCGGATACACTGCAAGAAGTATGGGGACGCATTTATTCC    750
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU05170___yd    701 TCGGGCCATTTCCGGATACACTGCAAGAAGTATGGGGACGCATTTATTCC    750

BSNT_00892___    751 GAATGGTTTCCATCGTCAAATTACGAACAAATAGAAGGTCCAGAAATATT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05170___yd    751 GAATGGTTTCCATCGTCAAATTACGAACAAATAGAAGGTCCAGAAATATT    800

BSNT_00892___    801 GTGGAATGAGCATAAGGATGTAACATCACCATCTTTTAAAAGTGAAATTT    850
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU05170___yd    801 GTGGAACGAGCATAAGGATGTAACATCACCATCTTTTAAAAGTGAAATTT    850

BSNT_00892___    851 GGATACCAATTACAAAAAAGGAATACGTTTTTTGA    885
                     ||||||||||.|||||||||.||            
BSU05170___yd    851 GGATACCAATCACAAAAAAGTAA------------    873


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