Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00888 and BSU05150

See Amino acid alignment / Visit BSNT_00888 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:19
# Commandline: needle
#    -asequence dna-align/BSNT_00888___ydeC.1.22522.seq
#    -bsequence dna-align/BSU05150___ydeC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00888___ydeC-BSU05150___ydeC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00888___ydeC-BSU05150___ydeC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00888___ydeC
# 2: BSU05150___ydeC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 876
# Identity:     863/876 (98.5%)
# Similarity:   863/876 (98.5%)
# Gaps:           0/876 ( 0.0%)
# Score: 4263.0
# 
#
#=======================================

BSNT_00888___      1 ATGAAGAATTTTGTGATCGATCAAAATTTAAAAGAATTAACAGAGCACCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05150___yd      1 ATGAAGAATTTTGTGATCGATCAAAATTTAAAAGAATTAACAGAGCACCG     50

BSNT_00888___     51 AACGGTAGAATTACCAGTTGCCTGTTACAAGACAAGGATCAATCAAAATA    100
                     ||||||||||||.|||||||||||.||||||||||.||||||||||||||
BSU05150___yd     51 AACGGTAGAATTGCCAGTTGCCTGCTACAAGACAACGATCAATCAAAATA    100

BSNT_00888___    101 TAAATGGCTATATTCCGCTTCATTGGCATGATGAAATCCAATTTGTTTTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05150___yd    101 TAAATGGCTATATTCCGCTTCATTGGCATGATGAAATCCAATTTGTTTTG    150

BSNT_00888___    151 ATACTAAAAGGGATAGCTCTCTTTCAAATAAATGAAGAAAAAATAGAGGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05150___yd    151 ATACTAAAAGGGATAGCTCTCTTTCAAATAAATGAAGAAAAAATAGAGGT    200

BSNT_00888___    201 TCACGAAGGGGATGGATTATTTATCAATAGCGGCTGCCTGCACATGGCAG    250
                     |||||||||||||||||||||||||||||||||||.||||||||||||.|
BSU05150___yd    201 TCACGAAGGGGATGGATTATTTATCAATAGCGGCTACCTGCACATGGCCG    250

BSNT_00888___    251 AAGAAAAGGAAGGCTCGGATTGTACGTATATTTGCTTGAATGTGTCACCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05150___yd    251 AAGAAAAGGAAGGCTCGGATTGTACGTATATTTGCTTGAATGTGTCACCC    300

BSNT_00888___    301 CATTTCGTTTTATCTCAAGAACTGTATTCCAGCTATGTTCAGCCCTATAT    350
                     |||||||||||||||||.|||||||||||.||||||||||||||||||||
BSU05150___yd    301 CATTTCGTTTTATCTCAGGAACTGTATTCAAGCTATGTTCAGCCCTATAT    350

BSNT_00888___    351 GTTTTCAACCAATTTGCCCTATGTATTTTTGGATGGAAATCAACAGTGGG    400
                     ||||||||||||||||||||||.|||||||||.|||||||||||||||||
BSU05150___yd    351 GTTTTCAACCAATTTGCCCTATTTATTTTTGGCTGGAAATCAACAGTGGG    400

BSNT_00888___    401 CAAAAAATATTCTAGATGCTGTTAAAAAAATAAATCAATTGATTCAACAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05150___yd    401 CAAAAAATATTCTAGATGCTGTTAAAAAAATAAATCAATTGATTCAACAA    450

BSNT_00888___    451 AAGACATCGCTCTATGAGATTGACATTACGATGCAATTAACGTTAATGTG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05150___yd    451 AAGACATCGCTCTATGAGATTGACATTACGATGCAATTAACGTTAATGTG    500

BSNT_00888___    501 GAAAAACATGGTCGTTAATGGTTTTCAATTAGAGTACGATCAATCTGAAA    550
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU05150___yd    501 GAAAAACCTGGTCGTTAATGGTTTTCAATTAGAGTACGATCAATCTGAAA    550

BSNT_00888___    551 TGATAAAAAGTCATCGAATGAAACAAATGTTAAACTGGATCCATCTCCAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05150___yd    551 TGATAAAAAGTCATCGAATGAAACAAATGTTAAACTGGATCCATCTCCAT    600

BSNT_00888___    601 TATGCTGAAAAAATCACATTAGAGGACATTGCAAAAGCTGGCCAACTGAG    650
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU05150___yd    601 TATGTTGAAAAAATCACATTAGAGGACATTGCAAAAGCTGGCCAACTGAG    650

BSNT_00888___    651 CCGTTCTGAGTGCTGCCGTTATTTTAAACGAATGCTGAATAAGACGCCAT    700
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU05150___yd    651 CCGTTCTGAATGCTGCCGTTATTTTAAACGAATGCTGAATAAGACGCCAT    700

BSNT_00888___    701 TACGTTATGTAATGGATTATAGAATTCAAAAAAGCTTATTATTACTGCAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05150___yd    701 TACGTTATGTAATGGATTATAGAATTCAAAAAAGCTTATTATTACTGCAA    750

BSNT_00888___    751 CACCCTGAATCCAATGTGACAGAAGTGTCTTATCAAGTTGGATTTAACAG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05150___yd    751 CACCCTGAATCCAATGTGACAGAAGTGTCTTATCAAGTTGGATTTAACAG    800

BSNT_00888___    801 TACCAGTTATTTCATAAGTAAATTTCAACAAGCGATGAATATGACGCCAT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05150___yd    801 TACCAGTTATTTCATAAGTAAATTTCAACAAGCGATGAATATGACGCCAT    850

BSNT_00888___    851 TATCATACAAAAAAATGAATTTATAA    876
                     |||||||||||||||||||||.||||
BSU05150___yd    851 TATCATACAAAAAAATGAATTCATAA    876


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