Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00882 and BSU05110

See Amino acid alignment / Visit BSNT_00882 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:18
# Commandline: needle
#    -asequence dna-align/BSNT_00882___ydeA.1.22522.seq
#    -bsequence dna-align/BSU05110___ydeA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00882___ydeA-BSU05110___ydeA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00882___ydeA-BSU05110___ydeA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00882___ydeA
# 2: BSU05110___ydeA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 594
# Identity:     593/594 (99.8%)
# Similarity:   593/594 (99.8%)
# Gaps:           0/594 ( 0.0%)
# Score: 2961.0
# 
#
#=======================================

BSNT_00882___      1 GTGAAAAAGGCGTTATTTCTTATATTAGACCAGTATGCAGATTGGGAAGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05110___yd      1 GTGAAAAAGGCGTTATTTCTTATATTAGACCAGTATGCAGATTGGGAAGG     50

BSNT_00882___     51 TGTTTACTTAGCATCTGCATTAAATCAAAGAGAAGATTGGTCGGTTCACA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05110___yd     51 TGTTTACTTAGCATCTGCATTAAATCAAAGAGAAGATTGGTCGGTTCACA    100

BSNT_00882___    101 CTGTTTCTTTAGACCCTATTGTAAGCTCAATAGGTGGTTTTAAAACATCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05110___yd    101 CTGTTTCTTTAGACCCTATTGTAAGCTCAATAGGTGGTTTTAAAACATCT    150

BSNT_00882___    151 GTCGATTACATAATAGGGTTAGAACCTGCAAATTTTAATTTGCTAGTTAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05110___yd    151 GTCGATTACATAATAGGGTTAGAACCTGCAAATTTTAATTTGCTAGTTAT    200

BSNT_00882___    201 GATTGGCGGGGATTCCTGGAGTAATGACAATAAAAAACTATTACATTTTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05110___yd    201 GATTGGCGGGGATTCCTGGAGTAATGACAATAAAAAACTATTACATTTTG    250

BSNT_00882___    251 TAAAAACTGCATTTCAAAAAAACATTCCAATAGCAGCGATATGCGGTGCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05110___yd    251 TAAAAACTGCATTTCAAAAAAACATTCCAATAGCAGCGATATGCGGTGCA    300

BSNT_00882___    301 GTGGATTTTTTGGCGAAGAATGGTTTGCTGAAAAATCATAGCCATACAGG    350
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU05110___yd    301 GTGGATTTTTTGGCGAAGAATGGTTTGCTGAATAATCATAGCCATACAGG    350

BSNT_00882___    351 TAATTTTGTTTACTTATGGAAAGATTACAAACAATATAAACCGATTAGCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05110___yd    351 TAATTTTGTTTACTTATGGAAAGATTACAAACAATATAAACCGATTAGCA    400

BSNT_00882___    401 GTTTTGTAGAGAAACAAGCAGTAAGAGATAAAAATTTGGTTACTGCTAAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05110___yd    401 GTTTTGTAGAGAAACAAGCAGTAAGAGATAAAAATTTGGTTACTGCTAAT    450

BSNT_00882___    451 GGAACTGCCCCTATTGAATTTACTAATTTAATTTTAGAGATGATTGATTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05110___yd    451 GGAACTGCCCCTATTGAATTTACTAATTTAATTTTAGAGATGATTGATTT    500

BSNT_00882___    501 TGATACTCCTGAGAACATAGAGAAAATGATGTATATGAATCGTTATGGTT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05110___yd    501 TGATACTCCTGAGAACATAGAGAAAATGATGTATATGAATCGTTATGGTT    550

BSNT_00882___    551 TTTATCATTTTTGTGATAAATATGGAAATCCATTTGTTGATTAA    594
                     ||||||||||||||||||||||||||||||||||||||||||||
BSU05110___yd    551 TTTATCATTTTTGTGATAAATATGGAAATCCATTTGTTGATTAA    594


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