Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00859 and BSU04980

See Amino acid alignment / Visit BSNT_00859 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:18
# Commandline: needle
#    -asequence dna-align/BSNT_00859___yddI.1.22522.seq
#    -bsequence dna-align/BSU04980___yddI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00859___yddI-BSU04980___yddI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00859___yddI-BSU04980___yddI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00859___yddI
# 2: BSU04980___yddI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 507
# Identity:     488/507 (96.3%)
# Similarity:   488/507 (96.3%)
# Gaps:           0/507 ( 0.0%)
# Score: 2380.0
# 
#
#=======================================

BSNT_00859___      1 ATGAAAACACATATTGCATGGGCTTCAGCTTGTTTNTTATTNATATTGTT     50
                     ||||||||||||||||||||||||||||||||||| ||||| .|..||||
BSU04980___yd      1 ATGAAAACACATATTGCATGGGCTTCAGCTTGTTTATTATTAGTCATGTT     50

BSNT_00859___     51 GACGGGATTTTTNACGAATGGACAGCAAACGTATAAGATTGAAAAGTTAA    100
                     .||.|||||||| ||||.||||||||||||||||||||||||||||||||
BSU04980___yd     51 AACTGGATTTTTCACGATTGGACAGCAAACGTATAAGATTGAAAAGTTAA    100

BSNT_00859___    101 ANGATAAAAATGAAGTTTTGAGCGAAAAAATTAAGGAANTGAACCATATA    150
                     | |||||||||||||||||||||||||||||||||||| |||||||||||
BSU04980___yd    101 AAGATAAAAATGAAGTTTTGAGCGAAAAAATTAAGGAATTGAACCATATA    150

BSNT_00859___    151 GAATCAACAAGNAGCGCTTCNGAAAANAAGGCATTTTTTGAAGCGTTTTT    200
                     ||||||||||| |||||||| ||||| |||||||||||||||||||||||
BSU04980___yd    151 GAATCAACAAGTAGCGCTTCGGAAAATAAGGCATTTTTTGAAGCGTTTTT    200

BSNT_00859___    201 TAATTACTCCGACATAGATAAACGATATGAAACAGTTAAGAAGCACACAA    250
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU04980___yd    201 TAATTACTCCGACATAGATATACGATATGAAACAGTTAAGAAGCACACAA    250

BSNT_00859___    251 CTGGAAAAGGGTTTGATTATGCATTCCCTTCTCGTTCTGATCAAAAGCAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04980___yd    251 CTGGAAAAGGGTTTGATTATGCATTCCCTTCTCGTTCTGATCAAAAGCAC    300

BSNT_00859___    301 ACAGTCAGTGTGCAAAGTGAGTTACTTTCACTAGAGAGTTATTCAAAGCC    350
                     ||||||||.|||||||||||.|||||.|||||||||||||||||||||||
BSU04980___yd    301 ACAGTCAGCGTGCAAAGTGAATTACTATCACTAGAGAGTTATTCAAAGCC    350

BSNT_00859___    351 GTTAGATGAGTCTCATGAATTGTTTTTAAACATTGTTGAAGTCGCCACAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04980___yd    351 GTTAGATGAGTCTCATGAATTGTTTTTAAACATTGTTGAAGTCGCCACAA    400

BSNT_00859___    401 CTGCAAATTCAGTCACTACGAATCAAGTGTTAATTGTACAAACGACTATG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04980___yd    401 CTGCAAATTCAGTCACTACGAATCAAGTGTTAATTGTACAAACGACTATG    450

BSNT_00859___    451 AAGAAAGAAAAGGATGGTTGGTTAGTCGATAATGTGCAGGTTAAGGGAAA    500
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU04980___yd    451 AAAAAAGAAAAGGATGGTTGGTTAGTCGATAATGTGCAGGTTAAGGGAAA    500

BSNT_00859___    501 TGGATAA    507
                     |||||||
BSU04980___yd    501 TGGATAA    507


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