Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00858 and BSU04970
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:18
# Commandline: needle
# -asequence dna-align/BSNT_00858___yddH.1.22522.seq
# -bsequence dna-align/BSU04970___yddH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00858___yddH-BSU04970___yddH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00858___yddH-BSU04970___yddH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00858___yddH
# 2: BSU04970___yddH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 994
# Identity: 948/994 (95.4%)
# Similarity: 948/994 (95.4%)
# Gaps: 8/994 ( 0.8%)
# Score: 4568.0
#
#
#=======================================
BSNT_00858___ 1 TTGATTAAGAGAAAA--TA--TCTTCTATCAATGATATTCTCAGCCCCTT 46
.||| ||||..|||| || ||||| |..||.|||||||.||.||||
BSU04970___yd 1 ATGA-TAAGTAAAAAGGTAGTTCTTC---CTTTGGTATTCTCGGCTCCTT 46
BSNT_00858___ 47 TTATCTTCTTTTTTGTTTTATCTATATTAGTGGTTATGACAATTTCAAGA 96
|||||||||||||||||||||.|||..|||||||||||||.|||||||||
BSU04970___yd 47 TTATCTTCTTTTTTGTTTTATGTATCGTAGTGGTTATGACGATTTCAAGA 96
BSNT_00858___ 97 GAAAATCAAGTCGGGGACGATTTTATAGGCGGTGGGGATGGCGAATATGA 146
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU04970___yd 97 GAAAATCAAGTCGGGGACGATTTTATAGGCGGCGGGGATGGCGAATATGA 146
BSNT_00858___ 147 AACAGTTGGCATTGCGCCGGAAGTGGAACGATTTAGAGCAGTATTTGAGA 196
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU04970___yd 147 AACAGTTGGAATTGCGCCGGAAGTGGAACGATTTAGAGCAGTATTTGAGA 196
BSNT_00858___ 197 AATATGCCCGTCAAGAAGGCGTTTTTGACCAAGTGAATATTATTATGGCG 246
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04970___yd 197 AATATGCCCGTCAAGAAGGCGTTTTTGACCAAGTGAATATTATTATGGCG 246
BSNT_00858___ 247 CTCACCATGCAAGAAAGTGGTGGGCGTTCTTTAGATATCATGCAAAGTTC 296
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04970___yd 247 CTCACCATGCAAGAAAGTGGTGGGCGTTCTTTAGATATCATGCAAAGTTC 296
BSNT_00858___ 297 CGAAAGTATTGGCTTACCTCCCAACTCCATAACTGACCCAGAACGTTCGA 346
|||||||||.||||||||||||||||||||||||||||||||||||||.|
BSU04970___yd 297 CGAAAGTATCGGCTTACCTCCCAACTCCATAACTGACCCAGAACGTTCAA 346
BSNT_00858___ 347 TTGAAGTCGGCATTAAACATTTTAAGAAGGTTTTTAAACAGGCTGGCGGT 396
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04970___yd 347 TTGAAGTCGGCATTAAACATTTTAAGAAGGTTTTTAAACAGGCTGGCGGT 396
BSNT_00858___ 397 GATGTTCGTTTAACCTTACAGGCATACAACTTTGGTTCTGGCTTTATAGA 446
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU04970___yd 397 GATGTTCGTTTAACCTTACAGGCATACAACTTTGGTTCTGGATTTATAGA 446
BSNT_00858___ 447 TTATGTCAAAAAGAATGGCGGGAAATACACAAAGAAATTGGCACTTGATT 496
.||||||||||||||||||||||||||||||||||||||.||||||||||
BSU04970___yd 447 CTATGTCAAAAAGAATGGCGGGAAATACACAAAGAAATTAGCACTTGATT 496
BSNT_00858___ 497 TCAGCCGATTGCAAGCTTTTAAAATGGGCTGGAAAAGCTACGGTGACCCA 546
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04970___yd 497 TCAGCCGATTGCAAGCTTTTAAAATGGGCTGGAAAAGCTACGGTGACCCA 546
BSNT_00858___ 547 AGTTATGTTGACCATGTCATGAGGTATGTGAAAGGCTCTGATAAAAATGT 596
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04970___yd 547 AGTTATGTTGACCATGTCATGAGGTATGTGAAAGGCTCTGATAAAAATGT 596
BSNT_00858___ 597 AAAGCCTGTGAACGGTTCTATGGATTTCTATGAAACGGTCATGAAAGAAG 646
.|||||||||||.||.||||||||||||||||||||||||||||||||||
BSU04970___yd 597 GAAGCCTGTGAAAGGCTCTATGGATTTCTATGAAACGGTCATGAAAGAAG 646
BSNT_00858___ 647 CTTTGAAATATGAAGGGCAACCGTATGCCTGGGGNGGTTCAAACCCGAAA 696
|||||||||||||||||||||||||||||||||| ||||||||||||.||
BSU04970___yd 647 CTTTGAAATATGAAGGGCAACCGTATGCCTGGGGAGGTTCAAACCCGGAA 696
BSNT_00858___ 697 ACTGGATTTGATTGTTCGGGCCTTGTTCANTGGTCTTTTGCGAAAGCTGG 746
|||||||||||||||||.||||||||||| ||||||||||||||||||||
BSU04970___yd 697 ACTGGATTTGATTGTTCTGGCCTTGTTCAGTGGTCTTTTGCGAAAGCTGG 746
BSNT_00858___ 747 AATCACTCTTCCAAGAACAGCACANGAACAACATGGNGCAACAAAGAAAA 796
||||||||||||.||||||||||| ||||||||||| |||||.|||||||
BSU04970___yd 747 AATCACTCTTCCTAGAACAGCACAAGAACAACATGGGGCAACCAAGAAAA 796
BSNT_00858___ 797 TAAGTGAAAAAGAAGCGACTGCGGGTGACTTAGTGTTCTTTGGNGGCACA 846
||||||||||||||||||||||||||||||||||||||||||| ||||||
BSU04970___yd 797 TAAGTGAAAAAGAAGCGACTGCGGGTGACTTAGTGTTCTTTGGCGGCACA 846
BSNT_00858___ 847 TANGAAGGAAAAGCCATTACTCACGTCGGNATCTATGTAGGCNATGGCAG 896
|| |||||||||||||||||||||||||| |||||||||||| |||||||
BSU04970___yd 847 TACGAAGGAAAAGCCATTACTCACGTCGGCATCTATGTAGGCAATGGCAG 896
BSNT_00858___ 897 AATGTTTAATTCNAATGACAGTGGAATNGAATATTCTGATCTGAAATCAG 946
|||||||||||| |||||||||||||| .|||||||||||||||||||||
BSU04970___yd 897 AATGTTTAATTCAAATGACAGTGGAATCCAATATTCTGATCTGAAATCAG 946
BSNT_00858___ 947 GTTACTGGAGAGANCACCTTGTATCTTTTGGACGCATTAAATAA 990
||||||||||||| ||||||||||||||||||||||||||||||
BSU04970___yd 947 GTTACTGGAGAGATCACCTTGTATCTTTTGGACGCATTAAATAA 990
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