Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00850 and BSU04940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:17
# Commandline: needle
# -asequence dna-align/BSNT_00850.1.22522.seq
# -bsequence dna-align/BSU04940___yddE.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00850-BSU04940___yddE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00850-BSU04940___yddE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00850
# 2: BSU04940___yddE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2394
# Identity: 1246/2394 (52.0%)
# Similarity: 1246/2394 (52.0%)
# Gaps: 1134/2394 (47.4%)
# Score: 6178.0
#
#
#=======================================
BSNT_00850 1 ATGCAAAATAAAGAAAAAGTTGAATCGTATAAAAAGAAGTGGCAGCATCT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04940___yd 1 ATGCAAAATAAAGAAAAAGTTGAATCGTATAAAAAGAAGTGGCAGCATCT 50
BSNT_00850 51 TTTTGAAGAAATTACATCTTATGAGGATTTTCACTTGATGATGTATCCAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04940___yd 51 TTTTGAAGAAATTACATCTTATGAGGATTTTCACTTGATGATGTATCCAA 100
BSNT_00850 101 GTGAGTATGAATTAGAAAAACGATTTAAGGATTTAGAAACAGATATTGCG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04940___yd 101 GTGAGTATGAATTAGAAAAACGATTTAAGGATTTAGAAACAGATATTGCG 150
BSNT_00850 151 GCAGATGCAATGGATGTGGCACGTTACTACAATGAAGAAACGGTAAGGCT 200
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU04940___yd 151 GCAGATGCAATGGATGTGGCACGTTACTACAATGAAGAAACCGTAAGGCT 200
BSNT_00850 201 GTTAGAACAGCGATTAGGAAGGCTGACAAAGTATGACTTCATATTAGGTG 250
|||||||||||||||||||||||||||||||||.||||||||.|||||||
BSU04940___yd 201 GTTAGAACAGCGATTAGGAAGGCTGACAAAGTACGACTTCATTTTAGGTG 250
BSNT_00850 251 TAAAACTGAAAAGCAGTCTTGTAAATATTAGTGTCGAACTTAAAGACAAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04940___yd 251 TAAAACTGAAAAGCAGTCTTGTAAATATTAGTGTCGAACTTAAAGACAAT 300
BSNT_00850 301 ATATTATCTTTTTTCAATACAGCGACTGATACAGTCGTGAAAATGCTCGG 350
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU04940___yd 301 ATACTATCTTTTTTCAATACAGCGACTGATACAGTCGTGAAAATGCTCGG 350
BSNT_00850 351 GTGGGAACAAAATGTTTCCACCTCTTTTTTTGAAAAATATGAGGAAGTCG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04940___yd 351 GTGGGAACAAAATGTTTCCACCTCTTTTTTTGAAAAATATGAGGAAGTCG 400
BSNT_00850 401 AAGAAACACTAGCGAATATCATGGCTTCTGTTCGCGGAGAACGGCTTTCA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04940___yd 401 AAGAAACACTAGCGAATATCATGGCTTCTGTTCGCGGAGAACGGCTTTCA 450
BSNT_00850 451 GAAACAGAAATGACATACATTAACCGTTATCACTTTGTACGTGGATTAAA 500
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU04940___yd 451 GAAACAGAAATGACATACATTAACCGTTATCACTTTGTACGTGGGTTAAA 500
BSNT_00850 501 GCACCAAACGAATGAAGAAAGTGAGATAAAGGATGTTCGCTCTATTACAA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04940___yd 501 GCACCAAACGAATGAAGAAAGTGAGATAAAGGATGTTCGCTCTATTACAA 550
BSNT_00850 551 ACACGATCATAGACCCCACTGACCCATCAGTNTTGCATTTGCATAGTGAN 600
||||||||||||||||||||||||||||||| |||||||||||||||||
BSU04940___yd 551 ACACGATCATAGACCCCACTGACCCATCAGTATTGCATTTGCATAGTGAT 600
BSNT_00850 601 CAAGATGAAGGCTATTCAGCTTTTGTCGTGATTGACGAATTTCTTCACAA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04940___yd 601 CAAGATGAAGGCTATTCAGCTTTTGTCGTGATTGACGAATTTCTTCACAA 650
BSNT_00850 651 TATGTCGGAAAGTGATTTGTTTTATGAAGCGCAGTCTCTTCCCTTCCCTG 700
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU04940___yd 651 TATGTCGGAAAGTGATTTGTTTTATGAAGCACAGTCTCTTCCCTTCCCTG 700
BSNT_00850 701 TTGAAGTTCAGATGAAAATTCAAACGGAATCAAAGTCCATTACCAAGCCT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04940___yd 701 TTGAAGTTCAGATGAAAATTCAAACGGAATCAAAGTCCATTACCAAGCCT 750
BSNT_00850 751 GCCCTCAACCTCAAAAGACAGCAATTGAAAGAAGAACAAAAAGAGCAACA 800
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU04940___yd 751 GCCCTCAACCTCAAAAGACAGCAATTGAAAGAAGAACAAAAAGAACAACA 800
BSNT_00850 801 AAGCACAGGCGATCGAAGTGATGTTTCCACTGTCACAAGTGCCACAATGA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04940___yd 801 AAGCACAGGCGATCGAAGTGATGTTTCCACTGTCACAAGTGCCACAATGA 850
BSNT_00850 851 TAAGGCATTTACAAGATGAAATAAAGAAAGAAGATGTGCATGTGATGAAC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04940___yd 851 TAAGGCATTTACAAGATGAAATAAAGAAAGAAGATGTGCATGTGATGAAC 900
BSNT_00850 901 TGGCTGTCGGTGATAGTCGTTCATGGAAAGACAAAAAAAGAGTGTGTGGG 950
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU04940___yd 901 TGGCTGTCGGTGATAGTCGTTCATGGAAAGACAAAAAAAGAATGTGTGGG 950
BSNT_00850 951 AAAAGCAACGATTGTCAAAAGGCATTTAAAAGGCGCTGGCATTACTTGTC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04940___yd 951 AAAAGCAACGATTGTCAAAAGGCATTTAAAAGGCGCTGGCATTACTTGTC 1000
BSNT_00850 1001 GGCTTCCGGTGGCTGATCAACTGAACCTTTTTTATAAAATGCTTCCTGGT 1050
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU04940___yd 1001 GGCTTCCGGTGGCTGATCAATTGAACCTTTTTTATAAAATGCTTCCTGGT 1050
BSNT_00850 1051 GAAAAGTTAGACATAACTGATAAGAACTGGATTCAAAAAACAACGCAAGA 1100
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU04940___yd 1051 GAAAAGTTAGACATAACCGATAAGAACTGGATTCAAAAAACAACGCAAGA 1100
BSNT_00850 1101 CGGTGTGGCTGAAAGTCTGTTTGCTGTTAACTCTGATATTGGTTCGAAAA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04940___yd 1101 CGGTGTGGCTGAAAGTCTGTTTGCTGTTAACTCTGATATTGGTTCGAAAA 1150
BSNT_00850 1151 TCGGGTTCTTTCTCGGTTGGGTTGATCGTTTCCAAGAGCACACCGACTTA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04940___yd 1151 TCGGGTTCTTTCTCGGTTGGGTTGATCGTTTCCAAGAGCACACCGACTTA 1200
BSNT_00850 1201 GAAAGTGCCATTATGTCCAGCCGTGATTTTGTTTTATTCCACCCTTTCTT 1250
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU04940___yd 1201 GAAAGTGCCATTATGTCCAGCCGTGATTTTGTCTTATTCCACCCTTTCTT 1250
BSNT_00850 1251 AGCGAATTAG---------------------------------------- 1260
|||||||.||
BSU04940___yd 1251 AGCGAATCAGCAGTTAAAAGGTTCAAAGACACGTTCTCCTCACTGCTTAA 1300
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 1301 TCACAGGAGACACAGGAAACGGCAAGTCATATCTAGCGAAATTGATCTTT 1350
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 1351 AACTATATCAGCATGTTAAACATCAAATCTCTGTATATAGACCCTAAAAA 1400
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 1401 GGAAATGAGAAAGTGGATTCAAAGAGTCTTGAATGATGAGTACATTAGAG 1450
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 1451 AGAACTTTCCCTTATATATTGCACATTTAGAGAAATACAACTATATCACG 1500
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 1501 CTAGATCATGAAAACACGCACAACTGGGGAGCGCTTGACCCTATCTCCTT 1550
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 1551 CCTCCCTCCTATGAAAGCAAAAGAGCTAGTTCAAGTCATTTTTGAACAAG 1600
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 1601 TATATGACTTTAAAGGGAAGGACGACATAAACACAGCTTTCCTTCGTGCT 1650
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 1651 ACGTCAGAAGTGATTGATGCGAAACAAAAAGGTGAACAGGTCGGCTCACT 1700
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 1701 TGATATTATTCGGAAGATGCAGAGCCATCCCGAAGAAGCTGTACAAAAAG 1750
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 1751 CTGGTGACTATTTAAATGAGGTCGTGTCAGATTCCATTTTGAAACTTTGT 1800
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 1801 ATTCATGATGGTTCAAATCCTGCATTGTCACTAGAAAAGCGAATTACCAT 1850
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 1851 TTTAGAAGTTGAAAATATGGATTTGCCGGATCATGCTGAGCGACTTGAAA 1900
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 1901 ACTACACGATATCACAACTAAAGTCTAGTGCGGTCATGTTTGCACTAGGT 1950
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 1951 AAGTTCTGCGAGCTATTCGGCATGAATCAAGACGAACAGACTGTTGAATT 2000
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 2001 TATAGATGAAGCTTGGATATTCACCACGTCACAACAAGGAAAAAAAGTAG 2050
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 2051 AAAGACAAATGCGCCGGATTGGTCGCTCATACAACAATGCGGAATACTTC 2100
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 2101 ATTTCTCAATCCACAAAAGACGCTTTAAAAGAAGAGGATTCTGGAAACTT 2150
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 2151 TGGCGTTGCCTTTGCTTTTGACGAACCAAACGAGCGTGAAGAAGTGTTGA 2200
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 2201 AATGGATGAACATGGAGGTCACAAAAGATAACAAAAAAATGATGGAATCC 2250
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 2251 ATGTTTCAAGGTCAATGCTTATTTAAAGATTACTATGGCCGCACCTCTAA 2300
BSNT_00850 1260 -------------------------------------------------- 1260
BSU04940___yd 2301 AATTTCGATTGAATGCCTATTCGAAGAATGGCAAGGTGCTCTGAAAACAG 2350
BSNT_00850 1260 -------------------------------------------- 1260
BSU04940___yd 2351 TTGAGAAAAAAGCCGTCGCATATGCGGAAGAAAAATATTTGTAA 2394
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