Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00836 and BSU04840

See Amino acid alignment / Visit BSNT_00836 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:15
# Commandline: needle
#    -asequence dna-align/BSNT_00836___ydcO.1.22522.seq
#    -bsequence dna-align/BSU04840___ydcO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00836___ydcO-BSU04840___ydcO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00836___ydcO-BSU04840___ydcO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00836___ydcO
# 2: BSU04840___ydcO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     256/261 (98.1%)
# Similarity:   256/261 (98.1%)
# Gaps:           0/261 ( 0.0%)
# Score: 1260.0
# 
#
#=======================================

BSNT_00836___      1 ATGAAAATAAGAGTAAATGCAACAATCATTACTGATGTTGAAGCTTTAAA     50
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU04840___yd      1 ATGAAAATAAGAGTGAATGCAACAATCATTACTGATGTTGAAGCTTTAAA     50

BSNT_00836___     51 GGCTGATAAGGATTTGAATCATTTTAAAGACTATGCCACTTGTGAAACAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04840___yd     51 GGCTGATAAGGATTTGAATCATTTTAAAGACTATGCCACTTGTGAAACAT    100

BSNT_00836___    101 TCGTTGTTGATGCTGATAATTATTTGAAGGCTAATGAAGAAATATCTGAG    150
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU04840___yd    101 TCGTTGTTGATGCTGATAATCATTTGAAGGCTAATGAAGAAATATCTGAG    150

BSNT_00836___    151 TTGTTAAAAGGTTGGGATTGGTGGTGTATCTGGTCAACTCGTCCATTGAG    200
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU04840___yd    151 TTGTTAAAAGGCTGGGATTGGTGGTGTATCTGGTCAACTCGTCCATTGAG    200

BSNT_00836___    201 TAAAAAGGATAACCAAGTGTTTACTTTGTATAACGATGATTTATATAACT    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU04840___yd    201 TAAAAAGGATAACCAAGTGTTTACTTTGTATAACGATGATTTGTATAACT    250

BSNT_00836___    251 TATGTCGCTAG    261
                     |||||||.|||
BSU04840___yd    251 TATGTCGATAG    261


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