Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00830 and BSU04800

See Amino acid alignment / Visit BSNT_00830 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:15
# Commandline: needle
#    -asequence dna-align/BSNT_00830___ydcL.1.22522.seq
#    -bsequence dna-align/BSU04800___ydcL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00830___ydcL-BSU04800___ydcL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00830___ydcL-BSU04800___ydcL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00830___ydcL
# 2: BSU04800___ydcL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1107
# Identity:    1097/1107 (99.1%)
# Similarity:  1097/1107 (99.1%)
# Gaps:           0/1107 ( 0.0%)
# Score: 5445.0
# 
#
#=======================================

BSNT_00830___      1 ATGTCTGTAAAAAAACTTGAAAATGGTCAATATCAAGTTGACGTTAGTTT     50
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU04800___yd      1 ATGTCTGTAAAAAAACTTGAAAATGGTCAATATCAAGTTGACGTTAGCTT     50

BSNT_00830___     51 TGGATTTGACCCGATTACTGGAGAAAGAATTAGGACGAGACCAGTAGCAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04800___yd     51 TGGATTTGACCCGATTACTGGAGAAAGAATTAGGACGAGACCAGTAGCAT    100

BSNT_00830___    101 CAACCAGAAAAGAGGCTTTAGAATTAGAAGCAAAATTAAGAAGAGAATTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04800___yd    101 CAACCAGAAAAGAGGCTTTAGAATTAGAAGCAAAATTAAGAAGAGAATTT    150

BSNT_00830___    151 CAAGAAGAAAGAGCAAGAAAGTCCAGATCAGTAAGCTTTCCGACTCTAAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04800___yd    151 CAAGAAGAAAGAGCAAGAAAGTCCAGATCAGTAAGCTTTCCGACTCTAAT    200

BSNT_00830___    201 TTCAATTTATTTAGCAAATTGTGAAATAGATAGTAAACCAAACTATTATC    250
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU04800___yd    201 TTCAATTTATTTAGCAAGTTGTGAAATAGATAGTAAACCAAACTATTATC    250

BSNT_00830___    251 AGAATCAGAAATACATTATAAACAAACATATATCTGATTACTTTTTGAAA    300
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU04800___yd    251 AGAATCAGAAGTACATTATAAACAAACATATATCTGATTACTTTTTGAAA    300

BSNT_00830___    301 TCTGATATACAAAAAATCACACATAGAGAAATAACTGATTTCAGAAAACA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04800___yd    301 TCTGATATACAAAAAATCACACATAGAGAAATAACTGATTTCAGAAAACA    350

BSNT_00830___    351 TTTAATGGAAACAGGTCTAAGCAATAAATCGGTTAATAATATAATGACTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04800___yd    351 TTTAATGGAAACAGGTCTAAGCAATAAATCGGTTAATAATATAATGACTA    400

BSNT_00830___    401 GTCTAAGCAAAATTTTTGATACAGCTGTACATGAAGAAATCTTAAAAAGA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04800___yd    401 GTCTAAGCAAAATTTTTGATACAGCTGTACATGAAGAAATCTTAAAAAGA    450

BSNT_00830___    451 AATCCGTGTGACAACGTTAAACGATTACCTTTAACAAGAAAGAAAATGAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04800___yd    451 AATCCGTGTGACAACGTTAAACGATTACCTTTAACAAGAAAGAAAATGAA    500

BSNT_00830___    501 GTTTTGGAGACCAGAAGAATTCAAAAAATTTATTAGTTTAATTCCTCAAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04800___yd    501 GTTTTGGAGACCAGAAGAATTCAAAAAATTTATTAGTTTAATTCCTCAAG    550

BSNT_00830___    551 ATCAATTATTGTTTAAAACATTTTATACTGTTGCTTTTTTAACTGGACTA    600
                     |||||||||||||||||||.|||||.||||||||||||||||||||||||
BSU04800___yd    551 ATCAATTATTGTTTAAAACCTTTTACACTGTTGCTTTTTTAACTGGACTA    600

BSNT_00830___    601 AGATGTGGTGAAATGCTCGCCCTGCAATGGAAAGATATTGACAAAATCTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04800___yd    601 AGATGTGGTGAAATGCTCGCCCTGCAATGGAAAGATATTGACAAAATCTT    650

BSNT_00830___    651 ATTAGAAATAGATGTGCATAAATCGTGCACCTGGCTTGATGGTCAATTTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04800___yd    651 ATTAGAAATAGATGTGCATAAATCGTGCACCTGGCTTGATGGTCAATTTG    700

BSNT_00830___    701 TTGTTACTACTCCAAAAACCAAAAATTCGATTCGGCGAGTTAGCATCAAT    750
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU04800___yd    701 TTGTTACTACTCCAAAAACTAAAAATTCGATTCGGCGAGTTAGCATCAAT    750

BSNT_00830___    751 AAAAAATTGCTTAAGCTACTAGAAAGCTGGAAAGAAGCACAAGAAGAGTT    800
                     ||||||||||||||||||||||||.|.|||||||||||||||||||||||
BSU04800___yd    751 AAAAAATTGCTTAAGCTACTAGAACGTTGGAAAGAAGCACAAGAAGAGTT    800

BSNT_00830___    801 GTTTAATGAATTAGGTATTAGACATTCACATGACACCTATATCTTTCAAT    850
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU04800___yd    801 GTTTAATGAATTAGGTATTAGACATTCACATGATACCTATATCTTTCAAT    850

BSNT_00830___    851 ATAAAGATACACCTTCAAGAAAAGATATTTTCAGTCGGAAGATTAAATAC    900
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU04800___yd    851 ATAAAGATACACCTTCAAGAAAAGATATTTTCAGTCGGAAAATTAAATAC    900

BSNT_00830___    901 TTTTGCAAGGATAGCGATCTTACTCCTATACGTTTACATGATTTTAGACA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04800___yd    901 TTTTGCAAGGATAGCGATCTTACTCCTATACGTTTACATGATTTTAGACA    950

BSNT_00830___    951 TTCACACGTTGCACTATTAATACACCAAGGAGAAGATTACATAACAATTA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04800___yd    951 TTCACACGTTGCACTATTAATACACCAAGGAGAAGATTACATAACAATTA   1000

BSNT_00830___   1001 AAGAGCGTTTAGGACATGGTTCTGTAAAAACAACAATTGATGTTTATGGA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04800___yd   1001 AAGAGCGTTTAGGACATGGTTCTGTAAAAACAACAATTGATGTTTATGGA   1050

BSNT_00830___   1051 CACCTATATCCAAACAAGCAAAAGGAAATGGCTGATAAATTAGATGACTT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04800___yd   1051 CACCTATATCCAAACAAGCAAAAGGAAATGGCTGATAAATTAGATGACTT   1100

BSNT_00830___   1101 ACTTTAG   1107
                     |||||||
BSU04800___yd   1101 ACTTTAG   1107


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