Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00815 and BSU04790

See Amino acid alignment / Visit BSNT_00815 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:15
# Commandline: needle
#    -asequence dna-align/BSNT_00815___ydcK.1.22522.seq
#    -bsequence dna-align/BSU04790___ydcK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00815___ydcK-BSU04790___ydcK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00815___ydcK-BSU04790___ydcK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00815___ydcK
# 2: BSU04790___ydcK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 453
# Identity:     438/453 (96.7%)
# Similarity:   438/453 (96.7%)
# Gaps:           0/453 ( 0.0%)
# Score: 2130.0
# 
#
#=======================================

BSNT_00815___      1 ATGGATAATATAGAGCTTCAAAAGCTGACAGAGGATATTTCTAAAACATA     50
                     ||||||||.|.|||||||||||||||||||||||||||||||.|||||||
BSU04790___yd      1 ATGGATAACAAAGAGCTTCAAAAGCTGACAGAGGATATTTCTGAAACATA     50

BSNT_00815___     51 TTTTAAAAAGCCGTTCCGCCATCAGGCGCTTTTTAATGACAGGCTTAAAA    100
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU04790___yd     51 TTTTAAAAAGCCGTTCCGCCATCAGGCGCTTTTTAATGACCGGCTTAAAA    100

BSNT_00815___    101 CCACGGGCGGAAGGTACCTGTTAACCTCTCATAACATTGAATTGAACAGA    150
                     ||||.|||||.|||||||||||||||||.|||||||||||||||||||||
BSU04790___yd    101 CCACTGGCGGCAGGTACCTGTTAACCTCCCATAACATTGAATTGAACAGA    150

BSNT_00815___    151 AAATATCTGATTGAACACGGCAGGGAGGAACTGATCGGCATCATCAAGCA    200
                     ||||||.||||||||||||||||||||||||||||.||||||||||||||
BSU04790___yd    151 AAATATTTGATTGAACACGGCAGGGAGGAACTGATTGGCATCATCAAGCA    200

BSNT_00815___    201 CGAGCTCTGCCATTATCATCTTCACCTTGAAGGAAAAGGGTACAAGCACA    250
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU04790___yd    201 CGAGCTCTGCCATTATCATCTTCATCTTGAAGGAAAAGGGTACAAGCACA    250

BSNT_00815___    251 GAGACAGAGATTTTAGAATGCTTTTGCAGCAAGTCAACGCGCCGAGGTTC    300
                     ||||||||||||||||||||||.||||||||.||||||||||||||||||
BSU04790___yd    251 GAGACAGAGATTTTAGAATGCTATTGCAGCAGGTCAACGCGCCGAGGTTC    300

BSNT_00815___    301 TGTACACCCCTTAAGAAAAAAGCGGAAAACAAAAAAACTTATATGTATAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04790___yd    301 TGTACACCCCTTAAGAAAAAAGCGGAAAACAAAAAAACTTATATGTATAT    350

BSNT_00815___    351 CTGTACGGCCTGCGGCCAACAGTATATAAAGAAGCGCGCCATGAACCCTG    400
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU04790___yd    351 CTGTACGACCTGCGGCCAACAGTATATAAAGAAGCGCGCCATGAACCCTG    400

BSNT_00815___    401 ACAGATACAGGTGCGGAAAATGCCGCGGAAAAATAAAAAGAATTTTTTCG    450
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU04790___yd    401 ACAGATACAGATGCGGAAAATGCCGCGGAAAAATAAAAAGAATTTTTTCG    450

BSNT_00815___    451 TAA    453
                     |.|
BSU04790___yd    451 TGA    453


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