Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00811 and BSU04780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:14
# Commandline: needle
# -asequence dna-align/BSNT_00811___ydcI.1.22522.seq
# -bsequence dna-align/BSU04780___ydcI.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00811___ydcI-BSU04780___ydcI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00811___ydcI-BSU04780___ydcI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00811___ydcI
# 2: BSU04780___ydcI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2160
# Identity: 2130/2160 (98.6%)
# Similarity: 2130/2160 (98.6%)
# Gaps: 0/2160 ( 0.0%)
# Score: 10530.0
#
#
#=======================================
BSNT_00811___ 1 ATGGAAACGTCAGCCCTTTTAAAACAGCAAATTGCGAAAGAAATAGGTTT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 1 ATGGAAACGTCAGCCCTTTTAAAACAGCAAATTGCGAAAGAAATAGGTTT 50
BSNT_00811___ 51 ATCACAAAAACACGTTGAAAGTGTCATCCGCCTGCTAGAAGACGGCAATA 100
||||||||||||||||||||||||||||||||||||.||.||||||||||
BSU04780___yd 51 ATCACAAAAACACGTTGAAAGTGTCATCCGCCTGCTTGAGGACGGCAATA 100
BSNT_00811___ 101 CAGTACCGTTTATTGCCCGGTATCGAAAAGAGCAGACGGGTTCAATGGAT 150
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 101 CAGTCCCGTTTATTGCCCGGTATCGAAAAGAGCAGACGGGTTCAATGGAT 150
BSNT_00811___ 151 GAGGTTCAGATTCAGACGATTTCTGAACGCTGGCAATACATACAAAACCT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 151 GAGGTTCAGATTCAGACGATTTCTGAACGCTGGCAATACATACAAAACCT 200
BSNT_00811___ 201 GAACCAGCGAAAAGAAGAAGTCATCAGGCTGATTGCAGAGCAGGATAAAC 250
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 201 GAATCAGCGAAAAGAAGAAGTCATCAGGCTGATTGCAGAGCAGGATAAAC 250
BSNT_00811___ 251 TGACAGATGATCTAAAAGGTAAAATCGAGCAATCGGTGAAGCTTCAGGAA 300
||||||||.||||||||.||||||||||||||||||||||||||||||||
BSU04780___yd 251 TGACAGATAATCTAAAACGTAAAATCGAGCAATCGGTGAAGCTTCAGGAA 300
BSNT_00811___ 301 GTGGAAGACCTTTACCGCCCTTATAAACAAAAACGCAAAACAAAGGCGAC 350
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU04780___yd 301 GTGGAAGACCTTTACCGCCCTTATAAACAAAAACGTAAAACAAAGGCGAC 350
BSNT_00811___ 351 AGTCGCCAAAAGCAAAGGCCTTGAGCCGCTTGCCGACTATATCCTGACAC 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 351 AGTCGCCAAAAGCAAAGGCCTTGAGCCGCTTGCCGACTATATCCTGACAC 400
BSNT_00811___ 401 TTCCCCAAGATGATCGTCTGGCAGCAACTGCAGACCAATACATCAGCGAA 450
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU04780___yd 401 TTCCCCAAGATGATCATCTGGCAGCAACTGCAGACCAATACATCAGCGAA 450
BSNT_00811___ 451 GAAAAAGAAGTGTTCACACGAGAAGAAGCGATTGAAGGCGCCAAGCACAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 451 GAAAAAGAAGTGTTCACACGAGAAGAAGCGATTGAAGGCGCCAAGCACAT 500
BSNT_00811___ 501 TATTGCGGAACAAATCTCAGACGAGCCGACCTTCAGAAAGTGGATTCGCC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 501 TATTGCGGAACAAATCTCAGACGAGCCGACCTTCAGAAAGTGGATTCGCC 550
BSNT_00811___ 551 AGGAAACCTTCAAAAGAGGAACCATTAAGTCCGCAGCCGGAAAGTCGGCA 600
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU04780___yd 551 AGGAAACCTTCAAAAGAGGAACCATTAAGTCTGCAGCCGGAAAGTCGGCA 600
BSNT_00811___ 601 GACACCGATGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 601 GACACCGATGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCC 650
BSNT_00811___ 651 AATTGCAAAAGTTGTTCCGCATAGGGTGCTGGCAATGAACCGCGGCGAAA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 651 AATTGCAAAAGTTGTTCCGCATAGGGTGCTGGCAATGAACCGCGGCGAAA 700
BSNT_00811___ 701 AAGAAGATATTTTAAAGGTAGCGATCGAACCGCCTGCGGATCACATTAAG 750
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 701 AAGAAGACATTTTAAAGGTAGCGATCGAACCGCCTGCGGATCACATTAAG 750
BSNT_00811___ 751 GCGTATTTAGAAAAACAAATCATCAAAAATCGCTCAACATCCGTAAGAGA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 751 GCGTATTTAGAAAAACAAATCATCAAAAATCGCTCAACATCCGTAAGAGA 800
BSNT_00811___ 801 GATTTTGCAGGAGACAATTGAAGACAGCTATAAAAGGCTGATCCAGCCGG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 801 GATTTTGCAGGAGACAATTGAAGACAGCTATAAAAGGCTGATCCAGCCGG 850
BSNT_00811___ 851 CAATCGAGCGTGAAATCAGGAAAGAGCTCTCAGAAAAAGCTGATGAACAG 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 851 CAATCGAGCGTGAAATCAGGAAAGAGCTCTCAGAAAAAGCTGATGAACAG 900
BSNT_00811___ 901 GCGATTCATATTTTCTCAGAGAACTTGAGAAAGCTTCTTTTGCAGCCGCC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 901 GCGATTCATATTTTCTCAGAGAACTTGAGAAAGCTTCTTTTGCAGCCGCC 950
BSNT_00811___ 951 GATGAAAGGCAAAACCGTTCTCGGTGTTGACCCAGCCTTTCGAACCGGCT 1000
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU04780___yd 951 GATGAAAGGCAAAACCGTTCTCGGTGTTGACCCAGCCTTTCGAACTGGCT 1000
BSNT_00811___ 1001 GTAAGCTCGCTGTGTCAGATGAGACTGGAAAAGTCTTGAAAATTGATGTG 1050
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU04780___yd 1001 GTAAGCTCGCTGTGTCAGATGAGACCGGAAAAGTCTTGAAAATTGATGTG 1050
BSNT_00811___ 1051 ATCTATCCGCATGCGCCAGTCAACAAAACAAAAGAAGCCCATGAAAAAGT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 1051 ATCTATCCGCATGCGCCAGTCAACAAAACAAAAGAAGCCCATGAAAAAGT 1100
BSNT_00811___ 1101 GAAAAAGATTCTTGAGCAGTATCAAGTCGAGATGGTGGCGATCGGAAACG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 1101 GAAAAAGATTCTTGAGCAGTATCAAGTCGAGATGGTGGCGATCGGAAACG 1150
BSNT_00811___ 1151 GCACAGCATCCAGAGAAACAGAACAATTCATCGTCAATGTACTGAAAGAC 1200
||||||||||||||||||||||.||||||||||||||||||||.|.||||
BSU04780___yd 1151 GCACAGCATCCAGAGAAACAGAGCAATTCATCGTCAATGTACTCAGAGAC 1200
BSNT_00811___ 1201 ATGCCGCGCAAAATTTATTATGTGATCGTCAATGAAGCGGGTGCAAGCGT 1250
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU04780___yd 1201 ATGCCGCGCAAAATTTATTATGTGATCGTCAATGAAGCGGGAGCAAGCGT 1250
BSNT_00811___ 1251 CTATTCGGCTTCAGAGCTGGCCCGAGAAGAATTCCCTGACCTTAAGGTTG 1300
||||||||||||||||||.|||.|||||||||||||||||||||||||||
BSU04780___yd 1251 CTATTCGGCTTCAGAGCTTGCCAGAGAAGAATTCCCTGACCTTAAGGTTG 1300
BSNT_00811___ 1301 AAGAGCGCAGTGCCGTGTCTATTGCGCGAAGACTTCAAGACCCGCTTGCG 1350
||||||||||||||||.||||||||.||.|||||||||||||||||.|||
BSU04780___yd 1301 AAGAGCGCAGTGCCGTATCTATTGCTCGGAGACTTCAAGACCCGCTCGCG 1350
BSNT_00811___ 1351 GAGCTCGTTAAAATCGATCCGAAGTCTGTTGGTGTCGGACAGTATCAGCA 1400
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU04780___yd 1351 GAGCTCGTTAAGATCGATCCGAAGTCTGTTGGTGTCGGACAGTATCAGCA 1400
BSNT_00811___ 1401 TGACGTCAGCCAAAAACGCTTAAATGAATCTCTGCGGTTTGTCGTCGAAA 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 1401 TGACGTCAGCCAAAAACGCTTAAATGAATCTCTGCGGTTTGTCGTCGAAA 1450
BSNT_00811___ 1451 CGGTCGTAAACCAGGTGGGAGTAAACGTCAACACAGCCTCCGCCGCGCTG 1500
|.||||||||||||||.|||||||||||||||||||||||||||||||||
BSU04780___yd 1451 CTGTCGTAAACCAGGTTGGAGTAAACGTCAACACAGCCTCCGCCGCGCTG 1500
BSNT_00811___ 1501 CTTCAGTATGTAGCGGGATTATCGAAGTCTGTAGCAGGCAACGTTGTCAA 1550
|||||.||||||||.|||||||||||||||||||||||||||||||||||
BSU04780___yd 1501 CTTCAATATGTAGCTGGATTATCGAAGTCTGTAGCAGGCAACGTTGTCAA 1550
BSNT_00811___ 1551 AAAACGTGAGGAAATCGGAAAGTTTTCAAATCGAAAAGAACTGAAGGACA 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 1551 AAAACGTGAGGAAATCGGAAAGTTTTCAAATCGAAAAGAACTGAAGGACA 1600
BSNT_00811___ 1601 TCCCAAGGTTAGGTGCGAAAACCTACGAGCAATGTATCGGTTTCTTAAGA 1650
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU04780___yd 1601 TCCCAAGGTTAGGTGCGAAAACCTATGAGCAATGTATCGGTTTCTTAAGA 1650
BSNT_00811___ 1651 GTGCAGGAAGGGACAGAGCCTTTGGATAGAACAGGCATCCACCCGGAAAG 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 1651 GTGCAGGAAGGGACAGAGCCTTTGGATAGAACAGGCATCCACCCGGAAAG 1700
BSNT_00811___ 1701 CTATAAAGAAACAAAAGCACTTTTGAAAAAACTCGGACTTTCAACAGAAC 1750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 1701 CTATAAAGAAACAAAAGCACTTTTGAAAAAACTCGGACTTTCAACAGAAC 1750
BSNT_00811___ 1751 ATATCGGCACGGCGGAATTGAAGGACAAAATCAATCAGCTGGCGCTCTCT 1800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 1751 ATATCGGCACGGCGGAATTGAAGGACAAAATCAATCAGCTGGCGCTCTCT 1800
BSNT_00811___ 1801 GAAACGGCAAAAGAGCTGGGAATCGGCGAAATCACTCTGAAAGACATTTG 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 1801 GAAACGGCAAAAGAGCTGGGAATCGGCGAAATCACTCTGAAAGACATTTG 1850
BSNT_00811___ 1851 TGAACAGCTGACAAGGCCGGAACGCGATCCGCGCGATGAGGTGCCTAAGC 1900
||||||||||||||||||||||||||||||.||||||.||||||||||||
BSU04780___yd 1851 TGAACAGCTGACAAGGCCGGAACGCGATCCACGCGATAAGGTGCCTAAGC 1900
BSNT_00811___ 1901 CTTTGCTGAAAACAGACGTCCTTCAGCTGGAAGATTTGAAAGAGGGAATG 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 1901 CTTTGCTGAAAACAGACGTCCTTCAGCTGGAAGATTTGAAAGAGGGAATG 1950
BSNT_00811___ 1951 GAACTGCAGGGCACCGTGCGCAATGTAGTGGACTTCGGAGCGTTTGTTGA 2000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 1951 GAACTGCAGGGCACCGTGCGCAATGTAGTGGACTTCGGAGCGTTTGTTGA 2000
BSNT_00811___ 2001 TATCGGAGTCAAACAAGACGGGCTTGTGCATATCTCAAAATTGAGCAATC 2050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 2001 TATCGGAGTCAAACAAGACGGGCTTGTGCATATCTCAAAATTGAGCAATC 2050
BSNT_00811___ 2051 AATTCGTCAAGCATCCTCTTGATGTCGTATCTGTCGGCGATATTGTGACA 2100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 2051 AATTCGTCAAGCATCCTCTTGATGTCGTATCTGTCGGCGATATTGTGACA 2100
BSNT_00811___ 2101 GTTTGGGTTGACGGCGTAGATGTACAAAAAGGCAGAGTATCGCTGTCTAT 2150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd 2101 GTTTGGGTTGACGGCGTAGATGTACAAAAAGGCAGAGTATCGCTGTCTAT 2150
BSNT_00811___ 2151 GGTAAAATAA 2160
||||||||||
BSU04780___yd 2151 GGTAAAATAA 2160
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