Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00807 and BSU04750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:14
# Commandline: needle
# -asequence dna-align/BSNT_00807.1.22522.seq
# -bsequence dna-align/BSU04750___ydcF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00807-BSU04750___ydcF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00807-BSU04750___ydcF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00807
# 2: BSU04750___ydcF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity: 202/294 (68.7%)
# Similarity: 202/294 (68.7%)
# Gaps: 87/294 (29.6%)
# Score: 980.0
#
#
#=======================================
BSNT_00807 0 -------------------------------------------------- 0
BSU04750___yd 1 ATGGAACGGAAGGAACATTGCTTCTGCAAGGAAAAACAATTCTCTTATGG 50
BSNT_00807 1 ------------------------------------ATGGCCAACATG-C 13
||||.||||||| |
BSU04750___yd 51 CTTGAGCATGTGGAGAAACATCGGGCGTTTTCTGTCATGGTCAACATGCC 100
BSNT_00807 14 CGCATAACAATGTAAAAATGGAGTTTTCTCACGTGCTTCAAAAGCAAAAA 63
||||||.||||||||.|||||||||||.||||||||||||||||||||||
BSU04750___yd 101 CGCATAGCAATGTAATAATGGAGTTTTTTCACGTGCTTCAAAAGCAAAAA 150
BSNT_00807 64 GAAGATTTGCGTATCACATATGGAATTGTATTAGAAGGCGCTGAAGCAAA 113
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU04750___yd 151 GAAGATTTGTGTATCACATATGGAATTGTATTAGAAGGCGCTGAAGCAAA 200
BSNT_00807 114 AAAGTGGGGAGAAATCATTGGGACTGAACTGTCTAAAGACATGCCGACGG 163
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04750___yd 201 AAAGTGGGGAGAAATCATTGGGACTGAACTGTCTAAAGACATGCCGACGG 250
BSNT_00807 164 CTGTCAGCAGGCTTGTCCATCTTTACGGAGGAGTGATAAAATGA 207
||||||||||||||||||||||||||||||||||||||||||||
BSU04750___yd 251 CTGTCAGCAGGCTTGTCCATCTTTACGGAGGAGTGATAAAATGA 294
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