Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00801 and BSU04700

See Amino acid alignment / Visit BSNT_00801 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:13
# Commandline: needle
#    -asequence dna-align/BSNT_00801___rsbU.1.22522.seq
#    -bsequence dna-align/BSU04700___rsbU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00801___rsbU-BSU04700___rsbU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00801___rsbU-BSU04700___rsbU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00801___rsbU
# 2: BSU04700___rsbU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1008
# Identity:     998/1008 (99.0%)
# Similarity:   998/1008 (99.0%)
# Gaps:           0/1008 ( 0.0%)
# Score: 4950.0
# 
#
#=======================================

BSNT_00801___      1 GTGGATTTTAGGGAGGTTATTGAGCAGCGGTATCATCAGCTGCTTAGCCG     50
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU04700___rs      1 GTGGATTTTAGGGAGGTTATTGAGCAGCGGTATCATCAGCTGCTTAGTCG     50

BSNT_00801___     51 ATATATAGCCGAATTAACAGAAACATCTTTATATCAAGCCCAAAAATTCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs     51 ATATATAGCCGAATTAACAGAAACATCTTTATATCAAGCCCAAAAATTCA    100

BSNT_00801___    101 GCCGAAAAACAATCGAGCACCAAATTCCTCCGGAAGAAATCATCAGCATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs    101 GCCGAAAAACAATCGAGCACCAAATTCCTCCGGAAGAAATCATCAGCATT    150

BSNT_00801___    151 CACAGAAAAGTGCTGAAGGAGCTGTATCCAAGTCTCCCGGAAGATGTGTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs    151 CACAGAAAAGTGCTGAAGGAGCTGTATCCAAGTCTCCCGGAAGATGTGTT    200

BSNT_00801___    201 TCATTCGCTGGATTTTTTAATAGAAGTCATGATTGGTTATGGAATGGCTT    250
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU04700___rs    201 TCATTCGCTGGATTTTTTAATAGAAGTCATGATTGGCTATGGAATGGCTT    250

BSNT_00801___    251 ATCAGGAGCATCAAACCCTTAGAGGGATACAGCAGGAAATCAAATCAGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs    251 ATCAGGAGCATCAAACCCTTAGAGGGATACAGCAGGAAATCAAATCAGAA    300

BSNT_00801___    301 ATTGAAATCGCGGCAAATGTCCAGCAGACGCTGCTCGGAACTAAAGTTCC    350
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU04700___rs    301 ATTGAAATCGCGGCAAATGTCCAGCAGACGCTTCTCGGAACTAAAGTTCC    350

BSNT_00801___    351 TCAGGAGGAAGCGCTGGATATCGGCGCCATCAGTGTTCCCGCTAAACAGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs    351 TCAGGAGGAAGCGCTGGATATCGGCGCCATCAGTGTTCCCGCTAAACAGA    400

BSNT_00801___    401 TGAGCGGTGATTACTACCACTTTGTCAAAGACAAGGAATCCATCAATATT    450
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU04700___rs    401 TGAGCGGTGATTACTACCACTTTGTCAAAGACAAGGAATCCATCAATATC    450

BSNT_00801___    451 GCAATCGCGGACGTGATCGGAAAAGGCATTCCAGCGGCTTTATGCATGTC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs    451 GCAATCGCGGACGTGATCGGAAAAGGCATTCCAGCGGCTTTATGCATGTC    500

BSNT_00801___    501 CATGATTAAATACGCGATGGACTCTTTGCCAGAAACGGGCATACACCCTT    550
                     |||||||||||||||.||||||||||||||.|||||||||||||||||||
BSU04700___rs    501 CATGATTAAATACGCAATGGACTCTTTGCCGGAAACGGGCATACACCCTT    550

BSNT_00801___    551 CTCAAGTGCTGAAAAATTTGAATCGTGTTGTTGAACAAAACGTTGATGCC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs    551 CTCAAGTGCTGAAAAATTTGAATCGTGTTGTTGAACAAAACGTTGATGCC    600

BSNT_00801___    601 AGTATGTTTATTACGATGTTTTATGCGAATTACAATATGGACAATCATCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU04700___rs    601 AGTATGTTTATTACGATGTTTTATGCGAATTACAATATGGACAAGCATCA    650

BSNT_00801___    651 ATTTACATATGCTTCAGCGGGACATGAACCGGGATTCTATTATTCTCAAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs    651 ATTTACATATGCTTCAGCGGGACATGAACCGGGATTCTATTATTCTCAAA    700

BSNT_00801___    701 AGGACAACACGTTTTACGATTTAGAGGCCAAAGGACTCGTTCTCGGCATC    750
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs    701 AAGACAACACGTTTTACGATTTAGAGGCCAAAGGACTCGTTCTCGGCATC    750

BSNT_00801___    751 TCGCAGGACTATGACTACAAACAATTCGATCAGCATCTGGAAAAGGGCGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs    751 TCGCAGGACTATGACTACAAACAATTCGATCAGCATCTGGAAAAGGGCGA    800

BSNT_00801___    801 TATGATTGTTTTATTTTCTGATGGCGTCACAGAATGCAGAACGGAAAACG    850
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU04700___rs    801 TATGATTGTTTTATTTTCTGACGGCGTCACAGAATGCAGAACGGAAAACG    850

BSNT_00801___    851 GTTTCTTGGAGCGTCCTGATCTGCAGAAGCTCATTGAGGAACATATGTGT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs    851 GTTTCTTGGAGCGTCCTGATCTGCAGAAGCTCATTGAGGAACATATGTGT    900

BSNT_00801___    901 TCCTCCGCGCAGGAAATGGTCAAAAACATTTATGACAGCCTCCTCAAATT    950
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs    901 TCCTCTGCGCAGGAAATGGTCAAAAACATTTATGACAGCCTCCTCAAATT    950

BSNT_00801___    951 GCAGGATTTTCAGCTTCACGATGATTTTACGTTAATTGTTTTGCGGAGAA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs    951 GCAGGATTTTCAGCTTCACGATGATTTTACGTTAATTGTTTTGCGGAGAA   1000

BSNT_00801___   1001 AGGTTTAA   1008
                     ||||||||
BSU04700___rs   1001 AGGTTTAA   1008


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