Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00799 and BSU04680

See Amino acid alignment / Visit BSNT_00799 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:13
# Commandline: needle
#    -asequence dna-align/BSNT_00799___rsbS.1.22522.seq
#    -bsequence dna-align/BSU04680___rsbS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00799___rsbS-BSU04680___rsbS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00799___rsbS-BSU04680___rsbS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00799___rsbS
# 2: BSU04680___rsbS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity:     363/366 (99.2%)
# Similarity:   363/366 (99.2%)
# Gaps:           0/366 ( 0.0%)
# Score: 1803.0
# 
#
#=======================================

BSNT_00799___      1 TTGAGACATCCGAAAATCCCGATCTTGAAACTGTATAATTGCTTATTAGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04680___rs      1 TTGAGACATCCGAAAATCCCGATCTTGAAACTGTATAATTGCTTATTAGT     50

BSNT_00799___     51 ATCCATTCAATGGGAACTTGATGACCAGACAGCATTAACTTTTCAAGAAG    100
                     .||||||||.||||||||||||||||||||||||||||||||||||||||
BSU04680___rs     51 GTCCATTCAGTGGGAACTTGATGACCAGACAGCATTAACTTTTCAAGAAG    100

BSNT_00799___    101 ACTTATTAAATAAAATATACGAAACAGGTGCTAACGGAGTCGTCATTGAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04680___rs    101 ACTTATTAAATAAAATATACGAAACAGGTGCTAACGGAGTCGTCATTGAC    150

BSNT_00799___    151 CTGACATCTGTGGATATGATTGATTCATTTATCGCGAAAGTGCTGGGCGA    200
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU04680___rs    151 CTGACATCTGTGGATATGATTGATTCATTTATCGCGAAAGTGCTGGGGGA    200

BSNT_00799___    201 CGTCATTACAATGTCTAAGTTAATGGGGGCTAAAGTCGTCTTGACCGGCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04680___rs    201 CGTCATTACAATGTCTAAGTTAATGGGGGCTAAAGTCGTCTTGACCGGCA    250

BSNT_00799___    251 TTCAGCCCGCTGTGGCAGTGACGCTGATTGAACTTGGAATCGCGCTTGAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04680___rs    251 TTCAGCCCGCTGTGGCAGTGACGCTGATTGAACTTGGAATCGCGCTTGAG    300

BSNT_00799___    301 GAAATCGAAACTGCGCTCGACTTAGAGCAGGGGCTTGAGACATTGAAGCG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04680___rs    301 GAAATCGAAACTGCGCTCGACTTAGAGCAGGGGCTTGAGACATTGAAGCG    350

BSNT_00799___    351 GGAATTGGGGGAATAG    366
                     ||||||||||||||||
BSU04680___rs    351 GGAATTGGGGGAATAG    366


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