Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00798 and BSU04670

See Amino acid alignment / Visit BSNT_00798 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:13
# Commandline: needle
#    -asequence dna-align/BSNT_00798___rsbR.1.22522.seq
#    -bsequence dna-align/BSU04670___rsbRA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00798___rsbR-BSU04670___rsbRA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00798___rsbR-BSU04670___rsbRA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00798___rsbR
# 2: BSU04670___rsbRA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 825
# Identity:     815/825 (98.8%)
# Similarity:   815/825 (98.8%)
# Gaps:           0/825 ( 0.0%)
# Score: 4035.0
# 
#
#=======================================

BSNT_00798___      1 TTGATGTCGAATCAGACTGTATACCAGTTCATTGCCGAAAATCAAAATGA     50
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU04670___rs      1 TTGATGTCGAACCAGACTGTATACCAGTTCATTGCCGAAAATCAAAATGA     50

BSNT_00798___     51 ACTGCTCCAATTGTGGACTGACACACTAAAAGAATTAAGCGAGCAAGAAT    100
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU04670___rs     51 ACTGCTCCAACTGTGGACTGACACACTAAAAGAATTAAGCGAGCAAGAAT    100

BSNT_00798___    101 CCTATCAGCTGACTGACCAAGTGTATGAAAATATATCTAAAGAATATATC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04670___rs    101 CCTATCAGCTGACTGACCAAGTGTATGAAAATATATCTAAAGAATATATC    150

BSNT_00798___    151 GACATTCTGCTGCTGTCTGTTAAGGACGAAAACGCTGCTGAAAGCCAAAT    200
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU04670___rs    151 GACATTCTGCTGCTGTCTGTTAAGGACGAAAATGCTGCTGAAAGCCAAAT    200

BSNT_00798___    201 CAGCGAACTGGCGCTTCGAGCAGTCCAAATCGGACTGTCTATGAAGTTTT    250
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU04670___rs    201 CAGCGAACTGGCGCTTCGAGCGGTCCAAATCGGACTGTCTATGAAGTTTT    250

BSNT_00798___    251 TGGCTACTGCGCTTGCTGAATTCTGGAAGCGTCTCTACACGAAAATGAAT    300
                     ||||||||||.|||||.|||||||||||||||||||||||||||||||||
BSU04670___rs    251 TGGCTACTGCACTTGCCGAATTCTGGAAGCGTCTCTACACGAAAATGAAT    300

BSNT_00798___    301 GATAAGAGATTGCCAGATCAAGAGAGCACGGAATTAATCTGGCAGATTGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04670___rs    301 GATAAGAGATTGCCAGATCAAGAGAGCACGGAATTAATCTGGCAGATTGA    350

BSNT_00798___    351 CCGCTTTTTCAGCCCGATTAACACAGAAATTTTTAATCAATACTCAATCT    400
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU04670___rs    351 TCGCTTTTTCAGCCCGATTAACACAGAAATTTTTAATCAATACTCAATCT    400

BSNT_00798___    401 CATGGGAAAAAACAGTATCTCTGCAAAAAATCGCACTGCAAGAGCTGTCT    450
                     |||||||||||||||||||.||||||||||||||.|||||||||||||||
BSU04670___rs    401 CATGGGAAAAAACAGTATCCCTGCAAAAAATCGCGCTGCAAGAGCTGTCT    450

BSNT_00798___    451 GCCCCGCTTATCCCGGTGTTTGAAAATATCACTGTGATGCCTCTTGTCGG    500
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU04670___rs    451 GCGCCGCTTATCCCGGTGTTTGAAAATATCACTGTGATGCCTCTTGTCGG    500

BSNT_00798___    501 AACAATTGATACCGAACGCGCGAAACGAATTATGGAAAACCTTCTTAATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04670___rs    501 AACAATTGATACCGAACGCGCGAAACGAATTATGGAAAACCTTCTTAATG    550

BSNT_00798___    551 GCGTCGTCAAACACCGTTCCCAAGTCGTGCTGATTGACATTACAGGTGTC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04670___rs    551 GCGTCGTCAAACACCGTTCCCAAGTCGTGCTGATTGACATTACAGGTGTC    600

BSNT_00798___    601 CCTGTCGTCGATACGATGGTTGCCCATCATATTATTCAGGCATCAGAAGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04670___rs    601 CCTGTCGTCGATACGATGGTTGCCCATCATATTATTCAGGCATCAGAAGC    650

BSNT_00798___    651 TGTAAGGCTTGTCGGAGCAAAATGCCTGCTGGCCGGAATCCGTCCGGAAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04670___rs    651 TGTAAGGCTTGTCGGAGCAAAATGCCTGCTGGCCGGAATCCGTCCGGAAA    700

BSNT_00798___    701 TTGCTCAAACAATCGTCAACCTGGGGATTGATTTATCCCAAGTTATAACT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04670___rs    701 TTGCTCAAACAATCGTCAACCTGGGGATTGATTTATCCCAAGTTATAACT    750

BSNT_00798___    751 AAGAATACCCTGCAAAAAGGAATTCAAACAGCATTGGAAATGACGGATCG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04670___rs    751 AAGAATACCCTGCAAAAAGGAATTCAAACAGCATTGGAAATGACGGATCG    800

BSNT_00798___    801 AAAAATCGTTTCATTGGGGGAATAA    825
                     |||||||||||||||||||||||||
BSU04670___rs    801 AAAAATCGTTTCATTGGGGGAATAA    825


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