Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00796 and BSU04650

See Amino acid alignment / Visit BSNT_00796 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:13
# Commandline: needle
#    -asequence dna-align/BSNT_00796___ydcD.1.22522.seq
#    -bsequence dna-align/BSU04650___endB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00796___ydcD-BSU04650___endB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00796___ydcD-BSU04650___endB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00796___ydcD
# 2: BSU04650___endB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     281/282 (99.6%)
# Similarity:   281/282 (99.6%)
# Gaps:           0/282 ( 0.0%)
# Score: 1401.0
# 
#
#=======================================

BSNT_00796___      1 TTGTCTGAATCCAGCGCAAGAACCGAAATGAAAATCAGCTTGCCCGAAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04650___en      1 TTGTCTGAATCCAGCGCAAGAACCGAAATGAAAATCAGCTTGCCCGAAAA     50

BSNT_00796___     51 CCTAGTAGCTGAATTGGATGGTGTAGCGATGCGGGAGAAACGAAGCAGAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04650___en     51 CCTAGTAGCTGAATTGGATGGTGTAGCGATGCGGGAGAAACGAAGCAGAA    100

BSNT_00796___    101 ACGAACTGATATCACAAGCAGTGAGAGCATATGTCAGCGAACGAACAACT    150
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU04650___en    101 ACGAACTGATATCACAAGCAGTGAGAGCGTATGTCAGCGAACGAACAACT    150

BSNT_00796___    151 CGTCACAACCGTGATTTGATGAGACGCGGCTATATGGAAATGGCGAAAAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04650___en    151 CGTCACAACCGTGATTTGATGAGACGCGGCTATATGGAAATGGCGAAAAT    200

BSNT_00796___    201 CAACCTGAATATTTCTTCTGAGGCTCACTTTGCGGAGTGCGAGGCTGAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04650___en    201 CAACCTGAATATTTCTTCTGAGGCTCACTTTGCGGAGTGCGAGGCTGAAA    250

BSNT_00796___    251 CGACAGTTGAGCGCTTAGTCAGCGGAGGATAA    282
                     ||||||||||||||||||||||||||||||||
BSU04650___en    251 CGACAGTTGAGCGCTTAGTCAGCGGAGGATAA    282


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