Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00794 and BSU04640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:12
# Commandline: needle
# -asequence dna-align/BSNT_00794___alr.1.22522.seq
# -bsequence dna-align/BSU04640___alrA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00794___alr-BSU04640___alrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00794___alr-BSU04640___alrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00794___alr
# 2: BSU04640___alrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1170
# Identity: 1151/1170 (98.4%)
# Similarity: 1151/1170 (98.4%)
# Gaps: 0/1170 ( 0.0%)
# Score: 5679.0
#
#
#=======================================
BSNT_00794___ 1 ATGAGCACAAAACCTTTTTACAGAGATACGTGGGCGGAAATTGACTTGTC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04640___al 1 ATGAGCACAAAACCTTTTTACAGAGATACGTGGGCGGAAATTGACTTGTC 50
BSNT_00794___ 51 CGCGATAAAGGAAAATGTCAGCAATATGAAAAAACATATCGGTGAACATG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04640___al 51 CGCGATAAAGGAAAATGTCAGCAATATGAAAAAACATATCGGTGAACATG 100
BSNT_00794___ 101 TCCACCTGATGGCAGTTGTGAAAGCAAACGCCTACGGGCATGGTGATGCA 150
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU04640___al 101 TCCACTTGATGGCAGTTGTGAAAGCAAACGCCTACGGGCATGGTGATGCA 150
BSNT_00794___ 151 GAAACAGCAAAGGCTGCTCTTGACGCAGGTGCTTCATGCTTGGCGGTGGC 200
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU04640___al 151 GAAACAGCAAAGGCTGCTCTTGACGCAGGTGCTTCATGCTTGGCCGTGGC 200
BSNT_00794___ 201 CATTTTGGATGAAGCGATTTCACTGCGTAAAAAGGGATTGAAGGCGCCTA 250
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU04640___al 201 CATTTTGGATGAAGCGATTTCACTGCGCAAAAAGGGATTGAAGGCGCCTA 250
BSNT_00794___ 251 TATTGGTGCTCGGCGCGGTTCCCCCGGAGTATGTGGCAATCGCTGCTGAG 300
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU04640___al 251 TATTGGTGCTTGGCGCGGTTCCCCCGGAGTATGTGGCAATCGCTGCTGAG 300
BSNT_00794___ 301 TATGACGTGACCTTAACGGGTTATTCTGTTGAATGGCTTCAGGAGGCTGC 350
|||||||||||||||||.|||||||||||||||||||||||||||||.||
BSU04640___al 301 TATGACGTGACCTTAACAGGTTATTCTGTTGAATGGCTTCAGGAGGCAGC 350
BSNT_00794___ 351 CCGCCACACGAAAAAAGGTTATCTTCATTTTCATCTGAAGGTCGATACGG 400
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU04640___al 351 CCGCCACACGAAAAAAGGTTCTCTTCATTTTCATCTGAAGGTCGATACGG 400
BSNT_00794___ 401 GGATGAACAGGCTTGGTGTAAAAACAGAGGAAGAAGTTCAGAACGTGATG 450
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU04640___al 401 GGATGAACAGACTTGGTGTAAAAACAGAGGAAGAAGTTCAGAACGTGATG 450
BSNT_00794___ 451 GCCATTCTTGACCGCAACCCTCGTTTAAAGTGCAAAGGGGTATTTACCCA 500
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU04640___al 451 GCAATTCTTGACCGCAACCCTCGTTTAAAGTGCAAAGGGGTATTTACCCA 500
BSNT_00794___ 501 TTTTGCGACAGCGGATGAAAAAGAAAGAGGCTATTTCTTAATGCAGTTTG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04640___al 501 TTTTGCGACAGCGGATGAAAAAGAAAGAGGCTATTTCTTAATGCAGTTTG 550
BSNT_00794___ 551 AGCGCTTTAAAGAGCTGATTGCTCCGCTGCCGTTAAAGAATCTGATGGTC 600
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU04640___al 551 AGCGCTTTAAAGAGCTGATTGCTCCGCTGCCGTTAAAGAATCTAATGGTC 600
BSNT_00794___ 601 CACTGCGCGAACAGCGCCGCCGGACTCCGGCTGAAAAAAGGCTTTTTTAA 650
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU04640___al 601 CACTGCGCGAACAGCGCCGCTGGACTCCGGCTGAAAAAAGGCTTTTTTAA 650
BSNT_00794___ 651 TGCAGTCAGATTCGGCATCGGCATGTATGGCCTTCGCCCGTCTGCTGACA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04640___al 651 TGCAGTCAGATTCGGCATCGGCATGTATGGCCTTCGCCCGTCTGCTGACA 700
BSNT_00794___ 701 TTTCGGACGAGATACCGTTTCAGCTGCGTCCGGCATTTACCCTGCATTCG 750
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU04640___al 701 TGTCGGACGAGATACCGTTTCAGCTGCGTCCGGCATTTACCCTGCATTCG 750
BSNT_00794___ 751 ACGCTGTCGCATGTCAAACTGATCAGAAAAGGCGAGAGCGTCAGCTACGG 800
||.|||||.|||||||||||||||||||||||||||||||||||||||||
BSU04640___al 751 ACACTGTCACATGTCAAACTGATCAGAAAAGGCGAGAGCGTCAGCTACGG 800
BSNT_00794___ 801 AGCCGAGTACACAGCAGAAAAAGACACATGGATCGGGACGGTGCCTGTAG 850
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU04640___al 801 AGCCGAGTACACAGCGGAAAAAGACACATGGATCGGGACGGTGCCTGTAG 850
BSNT_00794___ 851 GCTATGCGGACGGCTGGCTCCGAAAATTGAAAGGGACTGACATCCTTGTG 900
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU04640___al 851 GCTATGCGGACGGCTGGCTCCGAAAATTGAAAGGGACCGACATCCTTGTG 900
BSNT_00794___ 901 AAGGGAAAACGCTTGAAAATTGCCGGCCGAATTTGCATGGACCAATTTAT 950
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU04640___al 901 AAGGGAAAACGCCTGAAAATTGCCGGCCGAATTTGCATGGACCAATTTAT 950
BSNT_00794___ 951 GGTGGAGCTGGATCAGGAATATCCGCCGGGCACAAAAGTCACATTAATTG 1000
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU04640___al 951 GGTGGAGCTGGATCAGGAATATCCGCCGGGCACAAAAGTCACATTAATAG 1000
BSNT_00794___ 1001 GCCGGCAGGGGGATGAATATATTTCCATGGATGAGATTGCAGGAAGGCTC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04640___al 1001 GCCGGCAGGGGGATGAATATATTTCCATGGATGAGATTGCAGGAAGGCTC 1050
BSNT_00794___ 1051 GAAACCATTAACTATGAGGTGGCCTGTACAATAAGTTCCCGTGTTCCCCG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04640___al 1051 GAAACCATTAACTATGAGGTGGCCTGTACAATAAGTTCCCGTGTTCCCCG 1100
BSNT_00794___ 1101 TATGTTTTTGGAAAATGGGAGTATAATGGAAGTAAGAAATCCTTTATTGC 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04640___al 1101 TATGTTTTTGGAAAATGGGAGTATAATGGAAGTAAGAAATCCTTTATTGC 1150
BSNT_00794___ 1151 AGGTAAATACAAGCAATTAA 1170
|||||||||.||||||||||
BSU04640___al 1151 AGGTAAATATAAGCAATTAA 1170
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