Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00793 and BSU04630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:12
# Commandline: needle
# -asequence dna-align/BSNT_00793___ydcC.1.22522.seq
# -bsequence dna-align/BSU04630___ydcC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00793___ydcC-BSU04630___ydcC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00793___ydcC-BSU04630___ydcC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00793___ydcC
# 2: BSU04630___ydcC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1122
# Identity: 1014/1122 (90.4%)
# Similarity: 1014/1122 (90.4%)
# Gaps: 105/1122 ( 9.4%)
# Score: 5058.0
#
#
#=======================================
BSNT_00793___ 1 TTGAGGCTTTTATGGTACGCATCTGTTCTGCCTAAACGTGTACCGAGCGT 50
BSU04630___yd 0 -------------------------------------------------- 0
BSNT_00793___ 51 ACCGTTAAAGTCAAACAAGCGATTTCTTCCTTTTACATCAATTGAGAAAA 100
BSU04630___yd 0 -------------------------------------------------- 0
BSNT_00793___ 101 AGGGGTTGAAAAAGGTGAGAAAAAGCTTTGTTTTGCTTTTAACGGGACTG 150
|||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 1 -----TTGAAAAAGGTGAGAAAAAGCTTTGTTTTGCTTTTAACGGGACTG 45
BSNT_00793___ 151 CTTGCTGTTCTTATTCTTTCTGCCTGCGGGCAAAAAACACAGCAAGATAT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 46 CTTGCTGTTCTTATTCTTTCTGCCTGCGGGCAAAAAACACAGCAAGATAT 95
BSNT_00793___ 201 TGTGGCCGGGTTAGATGAAAAGGCGAAAGAATACACCTCGTACAAAGCAA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 96 TGTGGCCGGGTTAGATGAAAAGGCGAAAGAATACACCTCGTACAAAGCAA 145
BSNT_00793___ 251 AAGCGAAAATGACCATCGAGACAGGGAGTGAGCCTCAAGTATACAATGTG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 146 AAGCGAAAATGACCATCGAGACAGGGAGTGAGCCTCAAGTATACAATGTG 195
BSNT_00793___ 301 GAAATCTGGCACAAAAAGCCGTCTCTGTACAGGGTTTATTTAGAAAATCC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 196 GAAATCTGGCACAAAAAGCCGTCTCTGTACAGGGTTTATTTAGAAAATCC 245
BSNT_00793___ 351 GAAAAAGGACCAAAACCAAGTCATTTTACGAAATGAAAACGGAGTATTCG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 246 GAAAAAGGACCAAAACCAAGTCATTTTACGAAATGAAAACGGAGTATTCG 295
BSNT_00793___ 401 TTCTCACGCCGTCTTTAAATAAGAGCTTCAGATTTCAAAGCGATTGGCCG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 296 TTCTCACGCCGTCTTTAAATAAGAGCTTCAGATTTCAAAGCGATTGGCCG 345
BSNT_00793___ 451 AACAACAGCAGCCAGGTTTATCTGTTTGAATCGCTCGTAAAGGATGTTCA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 346 AACAACAGCAGCCAGGTTTATCTGTTTGAATCGCTCGTAAAGGATGTTCA 395
BSNT_00793___ 501 AAACGATTCGGATGCAGTTTTCACAGCGAAAGAAAAGAAATACGTATTCG 550
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU04630___yd 396 AAACGATTCGGATGCAGTTTTCACAGCGAAAGAAAAGAAATACGTATTTG 445
BSNT_00793___ 551 AAACAAAAACAAACTATCAGCATAACAAAATGCTGCCCACGCAAGAAATC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 446 AAACAAAAACAAACTATCAGCATAACAAAATGCTGCCCACGCAAGAAATC 495
BSNT_00793___ 601 ACATTTAACAAAAAAGATATGAGCCCGTCATCTGTCAAAGTGATGGATAC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 496 ACATTTAACAAAAAAGATATGAGCCCGTCATCTGTCAAAGTGATGGATAC 545
BSNT_00793___ 651 TGACCGCAAAGTGATGGTCAAAGTAGAATTCAGCAGCTTTGAATTTAATA 700
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 546 TGACCGGAAAGTGATGGTCAAAGTAGAATTCAGCAGCTTTGAATTTAATA 595
BSNT_00793___ 701 AACAATTTGATAAAGAATCATTTGATGAAAAGAAAAATATGACCCTTTCT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 596 AACAATTTGATAAAGAATCATTTGATGAAAAGAAAAATATGACCCTTTCT 645
BSNT_00793___ 751 CAAATGGATGTCGCCACAAGCGCGAAGCCTTCCGATACATTTGCGGTCAA 800
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU04630___yd 646 CAAATGGATGTCGCCACAAGCGCAAAGCCTTCCGATACATTTGCGGTCAA 695
BSNT_00793___ 801 AACGCCGCTGGAACTGCCGCTTGGCGTCAAGCTGCTTGAAGAAAAAGATA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 696 AACGCCGCTGGAACTGCCGCTTGGCGTCAAGCTGCTTGAAGAAAAAGATA 745
BSNT_00793___ 851 TATCTACTGAAGACGGGAAGCGCATCATCATGACGTACGGAGGAGAAAAA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 746 TATCTACTGAAGACGGGAAGCGCATCATCATGACGTACGGAGGAGAAAAA 795
BSNT_00793___ 901 TCATTTACGTTAATTCAGGAAAAAGCCCAGATTGCCAAGGCTTCCTCCTC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 796 TCATTTACGTTAATTCAGGAAAAAGCCCAGATTGCCAAGGCTTCCTCCTC 845
BSNT_00793___ 951 CGTTACGCTGAACGGCGAACCGGTAAATCTCGGCTACACCATCGGCGCCC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 846 CGTTACGCTGAACGGCGAACCGGTAAATCTCGGCTACACCATCGGCGCCC 895
BSNT_00793___ 1001 TGTCGGATGCATCATTATCATGGACATATGACGGCGTAGATTACCTTCTC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 896 TGTCGGATGCATCATTATCATGGACATATGACGGCGTAGATTACCTTCTC 945
BSNT_00793___ 1051 TCTTCTAAAGATCTTTCTAAAGAGGAAATGGTGACAGTAGCGAAAAGCAT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd 946 TCTTCTAAAGATCTTTCTAAAGAGGAAATGGTGACAGTAGCGAAAAGCAT 995
BSNT_00793___ 1101 GCAGGGACAATCATCGAAATAA 1122
||||||||||||||||||||||
BSU04630___yd 996 GCAGGGACAATCATCGAAATAA 1017
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