Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00791 and BSU04610

See Amino acid alignment / Visit BSNT_00791 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:12
# Commandline: needle
#    -asequence dna-align/BSNT_00791___ydcA.1.22522.seq
#    -bsequence dna-align/BSU04610___ydcA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00791___ydcA-BSU04610___ydcA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00791___ydcA-BSU04610___ydcA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00791___ydcA
# 2: BSU04610___ydcA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 600
# Identity:     584/600 (97.3%)
# Similarity:   584/600 (97.3%)
# Gaps:           0/600 ( 0.0%)
# Score: 2856.0
# 
#
#=======================================

BSNT_00791___      1 ATGTTTATACGGACTGAAAATTTTCAAACATTTATCAGGCTTTACCCCGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04610___yd      1 ATGTTTATACGGACTGAAAATTTTCAAACATTTATCAGGCTTTACCCCGT     50

BSNT_00791___     51 TGTCACCTTTATATTGGCTTTGCAAGCTGTTCTCTGGCTGTTTTTTTCAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04610___yd     51 TGTCACCTTTATATTGGCTTTGCAAGCTGTTCTCTGGCTGTTTTTTTCAC    100

BSNT_00791___    101 TTCCTGCCCATTCAGTCGTGTTATGGAGGGATACCGTCACAGGCTATAAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04610___yd    101 TTCCTGCCCATTCAGTCGTGTTATGGAGGGATACCGTCACAGGCTATAAT    150

BSNT_00791___    151 CTAGGTGTCGCAAACGGTGAATGGTGGCGGCTGATCACACCGATTTTGCT    200
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU04610___yd    151 CTAGGTGTCGCAAACGGTGAATGGTGGCGGCTTATCACACCGATTTTGCT    200

BSNT_00791___    201 GCACGCCGGTTTCACACATCTGCTGTTTAATTCCATGTCCATCTTTTTAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04610___yd    201 GCACGCCGGTTTCACACATCTGCTGTTTAATTCCATGTCCATCTTTTTAT    250

BSNT_00791___    251 TTGCCCCAGCTTTGGAACGCATGCTGGGAAAAGCGCATTTTCTTCTTGTA    300
                     |||||||.||||||||||||||||||||||||||||.|||.|||||||||
BSU04610___yd    251 TTGCCCCGGCTTTGGAACGCATGCTGGGAAAAGCGCGTTTCCTTCTTGTA    300

BSNT_00791___    301 TACGCCGGCTCCGGCATCATCGGCAATATTGGCACTTATGTTACAGAGCC    350
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU04610___yd    301 TACGCCGGCTCCGGCATCATCGGCAATATCGGCACTTATGTTACAGAGCC    350

BSNT_00791___    351 GCTTGATTACGTGCATGTCGGTGCTTCAGGCGCAATTTTCGGGCTATTCG    400
                     |||||||||||||||||||||.|||||||||||.||||||||||||||.|
BSU04610___yd    351 GCTTGATTACGTGCATGTCGGGGCTTCAGGCGCCATTTTCGGGCTATTTG    400

BSNT_00791___    401 GCGTGTACCTGTTTATGGTTCTTTTTCGCAATGAGCTAATAGGGCAGGAG    450
                     ||||.||||||||||||||||||||||||||||||.||||.|||||||||
BSU04610___yd    401 GCGTATACCTGTTTATGGTTCTTTTTCGCAATGAGTTAATTGGGCAGGAG    450

BSNT_00791___    451 CATTCCAAAATGATCATCACACTGCTCGCATTTGCCGTTCTCATGTCATT    500
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU04610___yd    451 CATTCCAAAATGATCATCACACTGCTCGCATTTGCCGTTCTCATGTCGTT    500

BSNT_00791___    501 TATCAACTCCAATATTAACATGATGGCTCATCTGTTTGGACTATGCGGCG    550
                     |||||||||||||||||||||||||||.|||.||||||||||||||||||
BSU04610___yd    501 TATCAACTCCAATATTAACATGATGGCCCATTTGTTTGGACTATGCGGCG    550

BSNT_00791___    551 GGTTTCTTCTTTCGTTTTTGTGTGTGCAAAAAAAAGAGCGGCGGTATTAA    600
                     |||||||||||||||||||.||.|||||||||||||||||||||||||||
BSU04610___yd    551 GGTTTCTTCTTTCGTTTTTATGCGTGCAAAAAAAAGAGCGGCGGTATTAA    600


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