Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00788 and BSU04590

See Amino acid alignment / Visit BSNT_00788 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:12
# Commandline: needle
#    -asequence dna-align/BSNT_00788___ydbS.1.22522.seq
#    -bsequence dna-align/BSU04590___ydbS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00788___ydbS-BSU04590___ydbS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00788___ydbS-BSU04590___ydbS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00788___ydbS
# 2: BSU04590___ydbS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 480
# Identity:     477/480 (99.4%)
# Similarity:   477/480 (99.4%)
# Gaps:           0/480 ( 0.0%)
# Score: 2373.0
# 
#
#=======================================

BSNT_00788___      1 TTGAGAGAGCAGCCAAAAAACCAAATCAGTCCAGACGGATTAAAGGTTTG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04590___yd      1 TTGAGAGAGCAGCCAAAAAACCAAATCAGTCCAGACGGATTAAAGGTTTG     50

BSNT_00788___     51 GCGACTTCAAGAGATCATCATATCCGCTGTTTGCTTGCTTATTGTCATTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04590___yd     51 GCGACTTCAAGAGATCATCATATCCGCTGTTTGCTTGCTTATTGTCATTG    100

BSNT_00788___    101 CAGTTGCAGTGTTAAGCTATTATTTTCATTGGCCGTACTGGATCAGCGGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04590___yd    101 CAGTTGCAGTGTTAAGCTATTATTTTCATTGGCCGTACTGGATCAGCGGC    150

BSNT_00788___    151 GTGCTCGGCGCAGTTTGGCTGCTGGGATCGATTGTGACGGTCTTTATCAT    200
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU04590___yd    151 GTGCTCGGCGCTGTTTGGCTGCTGGGATCGATTGTGACGGTCTTTATCAT    200

BSNT_00788___    201 TCCGAAGGTCCGTCATAAGGTGTGGCGATATGAAGTCCATGAACATGAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04590___yd    201 TCCGAAGGTCCGTCATAAGGTGTGGCGATATGAAGTCCATGAACATGAAA    250

BSNT_00788___    251 TAGATATTCAGTCAGGTATTTTTGTGGTGACACGTGTGATTGTTCCGATG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04590___yd    251 TAGATATTCAGTCAGGTATTTTTGTGGTGACACGTGTGATTGTTCCGATG    300

BSNT_00788___    301 GTCAGAGTTCAGCACGTCGATACGTCACAAGGGCCATTATTAAAAAAATA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04590___yd    301 GTCAGAGTTCAGCACGTCGATACGTCACAAGGGCCATTATTAAAAAAATA    350

BSNT_00788___    351 CAACCTGGCAACGGTGAAAATTTCCACGGCCGCGACCGTTCATTCGATCC    400
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU04590___yd    351 CAACCTGGCAACGGTGAAAATTTCCACAGCCGCGACCGTTCATTCGATCC    400

BSNT_00788___    401 CCGCTTTAGAGATGGAGGAAGCGGATCGGCTGAGAGACTCCATTTCCCGT    450
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU04590___yd    401 CCGCTTTAGAGATGGAGGAAGCGGATCGGCTAAGAGACTCCATTTCCCGT    450

BSNT_00788___    451 CTGGCGAGGGTGACTGACGATGATGTCTGA    480
                     ||||||||||||||||||||||||||||||
BSU04590___yd    451 CTGGCGAGGGTGACTGACGATGATGTCTGA    480


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